Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.52□□□□□ -2.17
PAX9P55771 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
PAX9P55771 AC018630.2-201ENST00000534866 2403 ntBASIC1.52□□□□□ -2.17
PAX9P55771 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PAX9P55771 Y_RNA.368-201ENST00000365547 113 ntBASIC1.51□□□□□ -2.17
PAX9P55771 Y_RNA.461-201ENST00000384263 103 ntBASIC1.51□□□□□ -2.17
PAX9P55771 SNORA67.3-201ENST00000384366 140 ntBASIC1.51□□□□□ -2.17
PAX9P55771 Y_RNA.518-201ENST00000384552 113 ntBASIC1.51□□□□□ -2.17
PAX9P55771 RN7SKP223-201ENST00000410582 62 ntBASIC1.51□□□□□ -2.17
PAX9P55771 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.51□□□□□ -2.17
PAX9P55771 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.51□□□□□ -2.17
PAX9P55771 AL445646.1-201ENST00000431784 216 ntBASIC1.51□□□□□ -2.17
PAX9P55771 AL162725.1-201ENST00000435405 301 ntBASIC1.51□□□□□ -2.17
PAX9P55771 HSPE1P9-201ENST00000440046 311 ntBASIC1.51□□□□□ -2.17
PAX9P55771 TRBVB-201ENST00000477100 408 ntBASIC1.51□□□□□ -2.17
PAX9P55771 RNU6-1278P-201ENST00000516130 107 ntBASIC1.51□□□□□ -2.17
PAX9P55771 SNORA31.10-201ENST00000516482 106 ntBASIC1.51□□□□□ -2.17
PAX9P55771 RNU2-31P-201ENST00000516954 155 ntBASIC1.51□□□□□ -2.17
PAX9P55771 AL162730.1-201ENST00000605734 292 ntBASIC1.51□□□□□ -2.17
PAX9P55771 MIR6079-201ENST00000635807 62 ntBASIC1.51□□□□□ -2.17
PAX9P55771 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PAX9P55771 U8.2-201ENST00000363156 134 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RNU6-801P-201ENST00000364087 105 ntBASIC1.5□□□□□ -2.17
PAX9P55771 Y_RNA.237-201ENST00000364439 102 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RNU6-326P-201ENST00000365480 107 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
PAX9P55771 SNORA64-201ENST00000384674 134 ntBASIC1.5□□□□□ -2.17
PAX9P55771 SNORA12.1-201ENST00000390873 148 ntBASIC1.5□□□□□ -2.17
PAX9P55771 SNORA3.2-201ENST00000408221 125 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RNU6-710P-201ENST00000410424 105 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RNU2-14P-201ENST00000411053 191 ntBASIC1.5□□□□□ -2.17
PAX9P55771 OOSP1P1-201ENST00000423265 274 ntBASIC1.5□□□□□ -2.17
PAX9P55771 HSPE1P21-201ENST00000438283 308 ntBASIC1.5□□□□□ -2.17
PAX9P55771 AC069257.2-201ENST00000441819 155 ntBASIC1.5□□□□□ -2.17
PAX9P55771 RPS4XP11-201ENST00000446897 772 ntBASIC1.5□□□□□ -2.17
PAX9P55771 SCARNA24.2-201ENST00000516968 130 ntBASIC1.5□□□□□ -2.17
PAX9P55771 DEFB108E-201ENST00000524692 240 ntBASIC1.5□□□□□ -2.17
PAX9P55771 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.5□□□□□ -2.17
PAX9P55771 MIR4419B-201ENST00000577260 68 ntBASIC1.5□□□□□ -2.17
PAX9P55771 MIR4513-201ENST00000581077 86 ntBASIC1.5□□□□□ -2.17
PAX9P55771 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.5□□□□□ -2.17
PAX9P55771 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
PAX9P55771 Y_RNA.341-201ENST00000365341 102 ntBASIC1.49□□□□□ -2.17
PAX9P55771 Y_RNA.456-201ENST00000384232 111 ntBASIC1.49□□□□□ -2.17
PAX9P55771 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PAX9P55771 snosnR66.1-201ENST00000391095 99 ntBASIC1.49□□□□□ -2.17
PAX9P55771 MIR1302-6-201ENST00000408466 90 ntBASIC1.49□□□□□ -2.17
PAX9P55771 RNU2-7P-201ENST00000410794 178 ntBASIC1.49□□□□□ -2.17
PAX9P55771 AL445685.2-201ENST00000422551 342 ntBASIC1.49□□□□□ -2.17
PAX9P55771 AC010154.1-201ENST00000425857 269 ntBASIC1.49□□□□□ -2.17
PAX9P55771 AC245047.3-201ENST00000429428 127 ntBASIC1.49□□□□□ -2.17
PAX9P55771 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.49□□□□□ -2.17
PAX9P55771 AC091959.1-201ENST00000495857 238 ntBASIC1.49□□□□□ -2.17
PAX9P55771 SERF1AP1-201ENST00000514575 187 ntBASIC1.49□□□□□ -2.17
PAX9P55771 RNU6-1291P-201ENST00000516591 104 ntBASIC1.49□□□□□ -2.17
PAX9P55771 RNU6-1096P-201ENST00000517089 102 ntBASIC1.49□□□□□ -2.17
PAX9P55771 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.49□□□□□ -2.17
PAX9P55771 AC091544.4-201ENST00000555268 342 ntBASIC1.49□□□□□ -2.17
PAX9P55771 MIR3122-201ENST00000577243 73 ntBASIC1.49□□□□□ -2.17
PAX9P55771 AC024614.2-201ENST00000577584 372 ntBASIC1.49□□□□□ -2.17
PAX9P55771 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
PAX9P55771 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.49□□□□□ -2.17
PAX9P55771 MIR8054-201ENST00000620877 86 ntBASIC1.49□□□□□ -2.17
PAX9P55771 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PAX9P55771 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PAX9P55771 RNU6-1048P-201ENST00000364054 107 ntBASIC1.48□□□□□ -2.17
PAX9P55771 RNU6-574P-201ENST00000384265 107 ntBASIC1.48□□□□□ -2.17
PAX9P55771 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PAX9P55771 SNORA26.5-201ENST00000391215 123 ntBASIC1.48□□□□□ -2.17
PAX9P55771 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.48□□□□□ -2.17
PAX9P55771 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.48□□□□□ -2.17
PAX9P55771 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.48□□□□□ -2.17
PAX9P55771 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
PAX9P55771 RPL36AP21-201ENST00000490372 323 ntBASIC1.48□□□□□ -2.17
PAX9P55771 RNU6-341P-201ENST00000516973 96 ntBASIC1.48□□□□□ -2.17
PAX9P55771 MIR4713-201ENST00000582691 75 ntBASIC1.48□□□□□ -2.17
PAX9P55771 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
PAX9P55771 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.48□□□□□ -2.17
PAX9P55771 WWP1P1-201ENST00000466609 2769 ntBASIC1.47□□□□□ -2.17
PAX9P55771 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PAX9P55771 AL391987.6-201ENST00000305671 199 ntBASIC1.47□□□□□ -2.17
PAX9P55771 SNORA1B-201ENST00000362535 133 ntBASIC1.47□□□□□ -2.17
PAX9P55771 Y_RNA.267-201ENST00000364679 109 ntBASIC1.47□□□□□ -2.17
PAX9P55771 SNORA53-201ENST00000391141 249 ntBASIC1.47□□□□□ -2.17
PAX9P55771 AC024067.1-201ENST00000426199 223 ntBASIC1.47□□□□□ -2.17
PAX9P55771 AC104332.1-201ENST00000440471 797 ntBASIC1.47□□□□□ -2.17
PAX9P55771 RNU7-94P-201ENST00000459576 63 ntBASIC1.47□□□□□ -2.17
PAX9P55771 RPS29P21-201ENST00000496272 170 ntBASIC1.47□□□□□ -2.17
PAX9P55771 Y_RNA.668-201ENST00000516233 93 ntBASIC1.47□□□□□ -2.17
PAX9P55771 AC136628.3-201ENST00000521868 290 ntBASIC1.47□□□□□ -2.17
PAX9P55771 CBX3P4-201ENST00000538909 354 ntBASIC1.47□□□□□ -2.17
PAX9P55771 MIR4503-201ENST00000582187 83 ntBASIC1.47□□□□□ -2.17
PAX9P55771 AL929325.1-201ENST00000603096 117 ntBASIC1.47□□□□□ -2.17
PAX9P55771 AC005972.2-201ENST00000604690 348 ntBASIC1.47□□□□□ -2.17
PAX9P55771 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.47□□□□□ -2.17
PAX9P55771 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.47□□□□□ -2.17
PAX9P55771 AC068700.1-201ENST00000565862 3754 ntBASIC1.47□□□□□ -2.17
PAX9P55771 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PAX9P55771 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms