Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
CDH11P55287 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH11P55287 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH11P55287 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
CDH11P55287 MIR4299-201ENST00000577899 72 ntBASIC1.65□□□□□ -2.15
CDH11P55287 AC091178.2-201ENST00000584401 117 ntBASIC1.65□□□□□ -2.15
CDH11P55287 DEFB117-201ENST00000602356 141 ntBASIC1.65□□□□□ -2.15
CDH11P55287 AC022217.4-201ENST00000604389 163 ntBASIC1.65□□□□□ -2.15
CDH11P55287 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
CDH11P55287 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
CDH11P55287 RNU4-90P-201ENST00000362773 141 ntBASIC1.64□□□□□ -2.15
CDH11P55287 Y_RNA.136-201ENST00000363444 102 ntBASIC1.64□□□□□ -2.15
CDH11P55287 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH11P55287 Y_RNA.459-201ENST00000384251 102 ntBASIC1.64□□□□□ -2.15
CDH11P55287 Y_RNA.518-201ENST00000384552 113 ntBASIC1.64□□□□□ -2.15
CDH11P55287 Y_RNA.574-201ENST00000384766 95 ntBASIC1.64□□□□□ -2.15
CDH11P55287 RNU6-1186P-201ENST00000410429 97 ntBASIC1.64□□□□□ -2.15
CDH11P55287 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH11P55287 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
CDH11P55287 Y_RNA.638-201ENST00000459374 113 ntBASIC1.64□□□□□ -2.15
CDH11P55287 SNORA70.12-201ENST00000516084 153 ntBASIC1.64□□□□□ -2.15
CDH11P55287 SNORA31.17-201ENST00000516953 127 ntBASIC1.64□□□□□ -2.15
CDH11P55287 RNU7-172P-201ENST00000517125 64 ntBASIC1.64□□□□□ -2.15
CDH11P55287 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
CDH11P55287 MIR3145-201ENST00000580727 82 ntBASIC1.64□□□□□ -2.15
CDH11P55287 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.64□□□□□ -2.15
CDH11P55287 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDH11P55287 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CDH11P55287 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.63□□□□□ -2.15
CDH11P55287 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CDH11P55287 RNU6-324P-201ENST00000363957 106 ntBASIC1.63□□□□□ -2.15
CDH11P55287 Y_RNA.310-201ENST00000365063 113 ntBASIC1.63□□□□□ -2.15
CDH11P55287 RNU6-290P-201ENST00000365212 101 ntBASIC1.63□□□□□ -2.15
CDH11P55287 RNU6-472P-201ENST00000384299 107 ntBASIC1.63□□□□□ -2.15
CDH11P55287 SNORD116-13-201ENST00000384408 92 ntBASIC1.63□□□□□ -2.15
CDH11P55287 RNU6-1203P-201ENST00000410703 110 ntBASIC1.63□□□□□ -2.15
CDH11P55287 AC003989.2-201ENST00000440224 169 ntBASIC1.63□□□□□ -2.15
CDH11P55287 RNU6-63P-201ENST00000516690 95 ntBASIC1.63□□□□□ -2.15
CDH11P55287 AL161670.1-201ENST00000554348 137 ntBASIC1.63□□□□□ -2.15
CDH11P55287 AC008269.2-201ENST00000561915 1105 ntBASIC1.63□□□□□ -2.15
CDH11P55287 AC073413.2-201ENST00000604332 360 ntBASIC1.63□□□□□ -2.15
CDH11P55287 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.63□□□□□ -2.15
CDH11P55287 MIR8062-201ENST00000621515 85 ntBASIC1.63□□□□□ -2.15
CDH11P55287 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CDH11P55287 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CDH11P55287 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CDH11P55287 RNU6-1309P-201ENST00000363305 108 ntBASIC1.62□□□□□ -2.15
CDH11P55287 Y_RNA.368-201ENST00000365547 113 ntBASIC1.62□□□□□ -2.15
CDH11P55287 Y_RNA.376-201ENST00000365638 108 ntBASIC1.62□□□□□ -2.15
CDH11P55287 MIR520A-201ENST00000384862 85 ntBASIC1.62□□□□□ -2.15
CDH11P55287 MT-TW-201ENST00000387382 68 ntBASIC1.62□□□□□ -2.15
CDH11P55287 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CDH11P55287 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH11P55287 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH11P55287 RPL36AP21-201ENST00000490372 323 ntBASIC1.62□□□□□ -2.15
CDH11P55287 MTCO2P24-201ENST00000515611 426 ntBASIC1.62□□□□□ -2.15
CDH11P55287 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH11P55287 AC015720.1-201ENST00000565251 277 ntBASIC1.62□□□□□ -2.15
CDH11P55287 AC004832.4-201ENST00000608952 331 ntBASIC1.62□□□□□ -2.15
CDH11P55287 AP001282.2-201ENST00000616149 309 ntBASIC1.62□□□□□ -2.15
CDH11P55287 AC018630.2-201ENST00000534866 2403 ntBASIC1.62□□□□□ -2.15
CDH11P55287 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH11P55287 Y_RNA.16-201ENST00000362421 102 ntBASIC1.61□□□□□ -2.15
CDH11P55287 Y_RNA.47-201ENST00000362697 108 ntBASIC1.61□□□□□ -2.15
CDH11P55287 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
CDH11P55287 RNA5SP109-201ENST00000391010 116 ntBASIC1.61□□□□□ -2.15
CDH11P55287 RNA5SP323-201ENST00000391094 133 ntBASIC1.61□□□□□ -2.15
CDH11P55287 RNA5SP511-201ENST00000410487 115 ntBASIC1.61□□□□□ -2.15
CDH11P55287 MTCYBP9-201ENST00000431021 303 ntBASIC1.61□□□□□ -2.15
CDH11P55287 MTCO1P5-201ENST00000433573 344 ntBASIC1.61□□□□□ -2.15
CDH11P55287 AL162725.1-201ENST00000435405 301 ntBASIC1.61□□□□□ -2.15
CDH11P55287 POLR2KP2-201ENST00000438155 177 ntBASIC1.61□□□□□ -2.15
CDH11P55287 AC069257.2-201ENST00000441819 155 ntBASIC1.61□□□□□ -2.15
CDH11P55287 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH11P55287 AC107393.1-201ENST00000512403 346 ntBASIC1.61□□□□□ -2.15
CDH11P55287 RNA5SP458-201ENST00000516188 119 ntBASIC1.61□□□□□ -2.15
CDH11P55287 RNU6-191P-201ENST00000516295 94 ntBASIC1.61□□□□□ -2.15
CDH11P55287 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
CDH11P55287 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CDH11P55287 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH11P55287 RNU4-80P-201ENST00000363200 141 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RNU6-238P-201ENST00000363313 106 ntBASIC1.6□□□□□ -2.15
CDH11P55287 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RNU6-326P-201ENST00000365480 107 ntBASIC1.6□□□□□ -2.15
CDH11P55287 Y_RNA.569-201ENST00000384749 103 ntBASIC1.6□□□□□ -2.15
CDH11P55287 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CDH11P55287 SNORA12.1-201ENST00000390873 148 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RNU6-710P-201ENST00000410424 105 ntBASIC1.6□□□□□ -2.15
CDH11P55287 CYCSP49-201ENST00000420810 319 ntBASIC1.6□□□□□ -2.15
CDH11P55287 AC010154.1-201ENST00000425857 269 ntBASIC1.6□□□□□ -2.15
CDH11P55287 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RPS20P10-201ENST00000451209 253 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RNU6-1278P-201ENST00000516130 107 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RNU6-1338P-201ENST00000516328 91 ntBASIC1.6□□□□□ -2.15
CDH11P55287 SNORA31.10-201ENST00000516482 106 ntBASIC1.6□□□□□ -2.15
CDH11P55287 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.6□□□□□ -2.15
CDH11P55287 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH11P55287 MIR4713-201ENST00000582691 75 ntBASIC1.6□□□□□ -2.15
CDH11P55287 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
CDH11P55287 MIR6079-201ENST00000635807 62 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms