Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 COX6CP10-201ENST00000416832 224 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 POLR2KP2-201ENST00000438155 177 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 RPS26P55-201ENST00000471178 356 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 RPL23AP63-201ENST00000498752 471 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 SNORA70.12-201ENST00000516084 153 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.91□□□□□ -2.1
NR1H2P55055 MIR3145-201ENST00000580727 82 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 DEFB117-201ENST00000602356 141 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
NR1H2P55055 SNORD114-7-201ENST00000362520 77 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 Y_RNA.47-201ENST00000362697 108 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 RNU1-22P-201ENST00000363334 158 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 Y_RNA.133-201ENST00000363428 110 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 MIR562-201ENST00000384894 95 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 MIR934-201ENST00000401241 83 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 MIR1267-201ENST00000408723 78 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 RPS26P45-201ENST00000471748 340 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 AL163195.1-201ENST00000496941 348 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 AC097462.1-201ENST00000514125 324 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 SCARNA16.3-201ENST00000516595 184 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 RNU6-570P-201ENST00000517051 105 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 RNU7-172P-201ENST00000517125 64 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.9□□□□□ -2.11
NR1H2P55055 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 U6.108-201ENST00000637764 58 ntBASIC1.9□□□□□ -2.11
NR1H2P55055 Y_RNA.84-201ENST00000363011 104 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 Y_RNA.149-201ENST00000363558 117 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 Y_RNA.541-201ENST00000384640 113 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 RNU2-61P-201ENST00000411069 191 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.89□□□□□ -2.11
NR1H2P55055 snoU13.27-201ENST00000459278 104 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 RNA5SP458-201ENST00000516188 119 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 Y_RNA.676-201ENST00000516393 96 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 RNU7-128P-201ENST00000517247 62 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 RPL21P9-201ENST00000556149 474 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 AC127459.3-201ENST00000624328 466 ntBASIC1.89□□□□□ -2.11
NR1H2P55055 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NR1H2P55055 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NR1H2P55055 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NR1H2P55055 RNU6-290P-201ENST00000365212 101 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 Y_RNA.376-201ENST00000365638 108 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 Y_RNA.569-201ENST00000384749 103 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.88□□□□□ -2.11
NR1H2P55055 RNU6-1337P-201ENST00000516525 95 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 RNU6-63P-201ENST00000516690 95 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.88□□□□□ -2.11
NR1H2P55055 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.88□□□□□ -2.11
NR1H2P55055 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.88□□□□□ -2.11
NR1H2P55055 MIR8062-201ENST00000621515 85 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.88□□□□□ -2.11
NR1H2P55055 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NR1H2P55055 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
NR1H2P55055 Y_RNA.16-201ENST00000362421 102 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 Y_RNA.164-201ENST00000363709 102 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 AC024067.1-201ENST00000426199 223 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NR1H2P55055 MTND3P2-201ENST00000438452 342 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.87□□□□□ -2.11
NR1H2P55055 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.87□□□□□ -2.11
NR1H2P55055 MTCO2P24-201ENST00000515611 426 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 MIR4709-201ENST00000577272 72 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 AC073413.2-201ENST00000604332 360 ntBASIC1.87□□□□□ -2.11
NR1H2P55055 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.87□□□□□ -2.11
NR1H2P55055 RNU4-80P-201ENST00000363200 141 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.86□□□□□ -2.11
NR1H2P55055 Y_RNA.418-201ENST00000384029 102 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 RNU6-136P-201ENST00000384663 107 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 RNU6-376P-201ENST00000384731 106 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 MIR568-201ENST00000385036 95 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 MIR1302-6-201ENST00000408466 90 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 RNU6-710P-201ENST00000410424 105 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 RN7SKP200-201ENST00000410564 320 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 RNU6-1203P-201ENST00000410703 110 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 MTCYBP9-201ENST00000431021 303 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 HSPE1P13-201ENST00000451143 297 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 TRBVB-201ENST00000477100 408 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 RNU6-1278P-201ENST00000516130 107 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 AL162424.1-201ENST00000602325 221 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 AL162730.1-201ENST00000605734 292 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
NR1H2P55055 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NR1H2P55055 Y_RNA.172-201ENST00000363765 102 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 RNU6-117P-201ENST00000365415 107 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 Y_RNA.461-201ENST00000384263 103 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 RNU6-855P-201ENST00000410395 104 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.85□□□□□ -2.11
NR1H2P55055 HMGN1P10-201ENST00000474557 553 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 RNU2-31P-201ENST00000516954 155 ntBASIC1.85□□□□□ -2.11
NR1H2P55055 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.85□□□□□ -2.11
NR1H2P55055 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NR1H2P55055 WWP1P1-201ENST00000466609 2769 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
NR1H2P55055 SNORD33-201ENST00000362761 85 ntBASIC1.84□□□□□ -2.11
NR1H2P55055 Y_RNA.238-201ENST00000364441 102 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms