Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
EPHA4P54764 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
EPHA4P54764 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.34□□□□□ -1.88
EPHA4P54764 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EPHA4P54764 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
EPHA4P54764 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHA4P54764 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHA4P54764 Y_RNA.85-201ENST00000363014 111 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 Y_RNA.213-201ENST00000364178 111 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 SNORA2.2-201ENST00000365473 135 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 MIR491-201ENST00000384877 84 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 RNA5SP120-201ENST00000410900 112 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 AC005326.1-201ENST00000429197 123 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 AC009238.1-201ENST00000442165 424 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 AC009237.6-201ENST00000446969 424 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
EPHA4P54764 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.33□□□□□ -1.88
EPHA4P54764 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHA4P54764 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
EPHA4P54764 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
EPHA4P54764 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA4P54764 RNU6-106P-201ENST00000384405 107 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 MIR483-201ENST00000385070 76 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
EPHA4P54764 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
EPHA4P54764 SNORA26.7-201ENST00000391288 122 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.32□□□□□ -1.88
EPHA4P54764 RN7SL330P-201ENST00000469709 307 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 AC018868.1-201ENST00000491307 315 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 RPS26P48-201ENST00000491713 339 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 AC004486.1-201ENST00000546846 233 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 AC006441.5-201ENST00000612680 209 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 CTSLP2-204ENST00000629029 392 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 AL589743.1-201ENST00000551932 2712 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.32□□□□□ -1.88
EPHA4P54764 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EPHA4P54764 PWAR6-201ENST00000552334 4618 ntBASIC3.32□□□□□ -1.88
EPHA4P54764 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA4P54764 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
EPHA4P54764 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA4P54764 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA4P54764 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA4P54764 RNU6-690P-201ENST00000365242 106 ntBASIC3.31□□□□□ -1.88
EPHA4P54764 MIR23A-201ENST00000385245 73 ntBASIC3.31□□□□□ -1.88
EPHA4P54764 AC107083.1-201ENST00000439643 279 ntBASIC3.31□□□□□ -1.88
EPHA4P54764 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.31□□□□□ -1.88
EPHA4P54764 RNU6-240P-201ENST00000516098 97 ntBASIC3.31□□□□□ -1.88
EPHA4P54764 AC026333.2-201ENST00000542164 106 ntBASIC3.31□□□□□ -1.88
EPHA4P54764 MIR5582-201ENST00000579697 68 ntBASIC3.31□□□□□ -1.88
EPHA4P54764 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.31□□□□□ -1.88
EPHA4P54764 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHA4P54764 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA4P54764 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
EPHA4P54764 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
EPHA4P54764 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
EPHA4P54764 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 SNORD115-28-201ENST00000363931 81 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 U8.5-201ENST00000364528 136 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 RNU6-1113P-201ENST00000384348 107 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 RNU6-1072P-201ENST00000384703 107 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 RNU6-443P-201ENST00000384780 107 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 SNORA11.4-201ENST00000408823 129 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
EPHA4P54764 RNU6-554P-201ENST00000410466 106 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.3□□□□□ -1.88
EPHA4P54764 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 AL163195.1-201ENST00000496941 348 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
EPHA4P54764 MIR4276-201ENST00000584832 70 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 MIR4762-201ENST00000585261 75 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 U4atac.1-201ENST00000618345 95 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
EPHA4P54764 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EPHA4P54764 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
EPHA4P54764 RNU6-766P-201ENST00000362478 107 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 RNY4P6-201ENST00000363667 96 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 Y_RNA.163-201ENST00000363702 113 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 Y_RNA.198-201ENST00000364013 98 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 SNORA38.1-201ENST00000364172 131 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 Y_RNA.336-201ENST00000365307 109 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 RNA5SP482-201ENST00000391269 118 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 RNY4P30-201ENST00000410216 95 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 RN7SKP284-201ENST00000411002 343 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 AC099677.2-201ENST00000436385 175 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 HMGN2P32-201ENST00000444648 269 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.29□□□□□ -1.88
EPHA4P54764 RPS27P29-201ENST00000463110 252 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.29□□□□□ -1.88
EPHA4P54764 SNORA74D-201ENST00000516404 141 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 RNU7-28P-201ENST00000516759 62 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA4P54764 MIR3651-201ENST00000630427 90 ntBASIC3.29□□□□□ -1.88
EPHA4P54764 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms