Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNU4-77P-201ENST00000516692 156 ntBASIC1.45□□□□□ -2.18
LIG4P49917 RNU6-1096P-201ENST00000517089 102 ntBASIC1.45□□□□□ -2.18
LIG4P49917 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.45□□□□□ -2.18
LIG4P49917 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.45□□□□□ -2.18
LIG4P49917 MIR5188-201ENST00000583467 113 ntBASIC1.45□□□□□ -2.18
LIG4P49917 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
LIG4P49917 AC242852.1-201ENST00000612151 96 ntBASIC1.45□□□□□ -2.18
LIG4P49917 AL138825.1-201ENST00000618587 192 ntBASIC1.45□□□□□ -2.18
LIG4P49917 AC244015.1-201ENST00000622301 99 ntBASIC1.45□□□□□ -2.18
LIG4P49917 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
LIG4P49917 RNU6-324P-201ENST00000363957 106 ntBASIC1.44□□□□□ -2.18
LIG4P49917 Y_RNA.230-201ENST00000364348 109 ntBASIC1.44□□□□□ -2.18
LIG4P49917 RNA5SP511-201ENST00000410487 115 ntBASIC1.44□□□□□ -2.18
LIG4P49917 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.44□□□□□ -2.18
LIG4P49917 CALM2P4-201ENST00000430810 426 ntBASIC1.44□□□□□ -2.18
LIG4P49917 AL160004.2-201ENST00000432935 350 ntBASIC1.44□□□□□ -2.18
LIG4P49917 HSPE1P13-201ENST00000451143 297 ntBASIC1.44□□□□□ -2.18
LIG4P49917 Y_RNA.638-201ENST00000459374 113 ntBASIC1.44□□□□□ -2.18
LIG4P49917 RNU6-966P-201ENST00000516479 104 ntBASIC1.44□□□□□ -2.18
LIG4P49917 RAB11AP2-201ENST00000545905 639 ntBASIC1.44□□□□□ -2.18
LIG4P49917 AL512310.8-201ENST00000550183 120 ntBASIC1.44□□□□□ -2.18
LIG4P49917 MIR4778-201ENST00000577635 80 ntBASIC1.44□□□□□ -2.18
LIG4P49917 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
LIG4P49917 AL606534.2-204ENST00000635008 178 ntBASIC1.44□□□□□ -2.18
LIG4P49917 AC005592.1-201ENST00000566527 1640 ntBASIC1.44□□□□□ -2.18
LIG4P49917 RNU6-424P-201ENST00000384367 105 ntBASIC1.43□□□□□ -2.18
LIG4P49917 RNA5SP482-201ENST00000391269 118 ntBASIC1.43□□□□□ -2.18
LIG4P49917 U8.16-201ENST00000391279 133 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AL354751.2-201ENST00000415471 210 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AL049830.1-201ENST00000468034 425 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AC092991.1-201ENST00000477176 376 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AL163540.1-201ENST00000485382 386 ntBASIC1.43□□□□□ -2.18
LIG4P49917 CYP3A52P-201ENST00000563326 91 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AC022441.3-201ENST00000605737 136 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AL133255.1-201ENST00000606374 441 ntBASIC1.43□□□□□ -2.18
LIG4P49917 AC106754.2-201ENST00000623006 233 ntBASIC1.43□□□□□ -2.18
LIG4P49917 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LIG4P49917 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LIG4P49917 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LIG4P49917 Y_RNA.197-201ENST00000364004 102 ntBASIC1.42□□□□□ -2.18
LIG4P49917 RNU4-76P-201ENST00000364509 141 ntBASIC1.42□□□□□ -2.18
LIG4P49917 MIR758-201ENST00000390227 88 ntBASIC1.42□□□□□ -2.18
LIG4P49917 RNU2-61P-201ENST00000411069 191 ntBASIC1.42□□□□□ -2.18
LIG4P49917 AL162725.1-201ENST00000435405 301 ntBASIC1.42□□□□□ -2.18
LIG4P49917 RPEP5-201ENST00000441137 268 ntBASIC1.42□□□□□ -2.18
LIG4P49917 RPL39P38-201ENST00000467018 153 ntBASIC1.42□□□□□ -2.18
LIG4P49917 RNU6-436P-201ENST00000516171 114 ntBASIC1.42□□□□□ -2.18
LIG4P49917 SNORA40.14-201ENST00000516543 86 ntBASIC1.42□□□□□ -2.18
LIG4P49917 RN7SKP295-201ENST00000517264 153 ntBASIC1.42□□□□□ -2.18
LIG4P49917 AL358944.1-201ENST00000528537 144 ntBASIC1.42□□□□□ -2.18
LIG4P49917 AL117336.2-201ENST00000602435 335 ntBASIC1.42□□□□□ -2.18
LIG4P49917 SNORD58B-201ENST00000607313 66 ntBASIC1.42□□□□□ -2.18
LIG4P49917 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.42□□□□□ -2.18
LIG4P49917 AC010205.1-201ENST00000616668 449 ntBASIC1.42□□□□□ -2.18
LIG4P49917 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
LIG4P49917 AL391987.6-201ENST00000305671 199 ntBASIC1.41□□□□□ -2.18
LIG4P49917 RNU6-1175P-201ENST00000365200 107 ntBASIC1.41□□□□□ -2.18
LIG4P49917 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
LIG4P49917 SNORD116-13-201ENST00000384408 92 ntBASIC1.41□□□□□ -2.18
LIG4P49917 Y_RNA.570-201ENST00000384750 101 ntBASIC1.41□□□□□ -2.18
LIG4P49917 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
LIG4P49917 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
LIG4P49917 RPL30P7-201ENST00000479312 323 ntBASIC1.41□□□□□ -2.18
LIG4P49917 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
LIG4P49917 MIR3664-201ENST00000579074 99 ntBASIC1.41□□□□□ -2.18
LIG4P49917 RPS29P30-201ENST00000600975 111 ntBASIC1.41□□□□□ -2.18
LIG4P49917 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.41□□□□□ -2.18
LIG4P49917 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
LIG4P49917 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
LIG4P49917 Y_RNA.80-201ENST00000362996 102 ntBASIC1.4□□□□□ -2.19
LIG4P49917 Y_RNA.338-201ENST00000365320 114 ntBASIC1.4□□□□□ -2.19
LIG4P49917 Y_RNA.485-201ENST00000384395 102 ntBASIC1.4□□□□□ -2.19
LIG4P49917 RNY1P14-201ENST00000384426 108 ntBASIC1.4□□□□□ -2.19
LIG4P49917 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LIG4P49917 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
LIG4P49917 RPL30P13-201ENST00000418873 348 ntBASIC1.4□□□□□ -2.19
LIG4P49917 RPS4XP11-201ENST00000446897 772 ntBASIC1.4□□□□□ -2.19
LIG4P49917 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
LIG4P49917 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.4□□□□□ -2.19
LIG4P49917 AC108729.3-201ENST00000513484 108 ntBASIC1.4□□□□□ -2.19
LIG4P49917 RNU6-1170P-201ENST00000515974 106 ntBASIC1.4□□□□□ -2.19
LIG4P49917 MIR4498-201ENST00000577599 66 ntBASIC1.4□□□□□ -2.19
LIG4P49917 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.4□□□□□ -2.19
LIG4P49917 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
LIG4P49917 AL080274.1-201ENST00000605565 220 ntBASIC1.4□□□□□ -2.19
LIG4P49917 AL121655.1-201ENST00000605811 308 ntBASIC1.4□□□□□ -2.19
LIG4P49917 Y_RNA.772-201ENST00000606692 102 ntBASIC1.4□□□□□ -2.19
LIG4P49917 AC006157.1-201ENST00000611750 366 ntBASIC1.4□□□□□ -2.19
LIG4P49917 RNU6-199P-201ENST00000362954 107 ntBASIC1.39□□□□□ -2.19
LIG4P49917 RNU4-41P-201ENST00000364426 143 ntBASIC1.39□□□□□ -2.19
LIG4P49917 Y_RNA.458-201ENST00000384240 102 ntBASIC1.39□□□□□ -2.19
LIG4P49917 AC022028.1-201ENST00000412054 408 ntBASIC1.39□□□□□ -2.19
LIG4P49917 RPL23AP36-201ENST00000413895 458 ntBASIC1.39□□□□□ -2.19
LIG4P49917 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.39□□□□□ -2.19
LIG4P49917 MTND1P14-201ENST00000427400 950 ntBASIC1.39□□□□□ -2.19
LIG4P49917 AC005042.3-201ENST00000453230 174 ntBASIC1.39□□□□□ -2.19
LIG4P49917 AC093850.1-201ENST00000454121 251 ntBASIC1.39□□□□□ -2.19
LIG4P49917 RNU7-12P-201ENST00000516030 62 ntBASIC1.39□□□□□ -2.19
LIG4P49917 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms