Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.29□□□□□ -1.72
PRIM1P49642 RPL12P50-201ENST00000603116 116 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 AC022217.4-201ENST00000604389 163 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 MIR1248-201ENST00000629190 106 ntBASIC4.29□□□□□ -1.72
PRIM1P49642 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRIM1P49642 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.29□□□□□ -1.72
PRIM1P49642 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.28□□□□□ -1.72
PRIM1P49642 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PRIM1P49642 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PRIM1P49642 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRIM1P49642 snoU2-30.2-201ENST00000362805 70 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 Y_RNA.107-201ENST00000363190 121 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 Y_RNA.298-201ENST00000364960 107 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 RNY1P6-201ENST00000384193 109 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 MIR548D2-201ENST00000384955 97 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 AC109327.2-201ENST00000448339 378 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 AC141557.1-201ENST00000540982 400 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 MIR1245B-201ENST00000636115 69 ntBASIC4.28□□□□□ -1.72
PRIM1P49642 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRIM1P49642 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.28□□□□□ -1.72
PRIM1P49642 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
PRIM1P49642 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRIM1P49642 RNU6-442P-201ENST00000383968 104 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 Y_RNA.454-201ENST00000384224 113 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 RNU6-1152P-201ENST00000384576 107 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 RPS12P18-201ENST00000442381 270 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 AL357552.1-201ENST00000445254 415 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 RNU7-80P-201ENST00000459562 61 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 AC107297.1-201ENST00000459991 176 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.27□□□□□ -1.73
PRIM1P49642 AC008885.1-201ENST00000514930 301 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 SCGB1D5P-201ENST00000515134 247 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 RNU6-109P-201ENST00000516364 107 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 RNU6-184P-201ENST00000516514 107 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.27□□□□□ -1.73
PRIM1P49642 AP002004.2-201ENST00000531656 154 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 AC091544.4-201ENST00000555268 342 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.27□□□□□ -1.73
PRIM1P49642 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.27□□□□□ -1.73
PRIM1P49642 AC006441.5-201ENST00000612680 209 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 MIR6079-201ENST00000635807 62 ntBASIC4.27□□□□□ -1.73
PRIM1P49642 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRIM1P49642 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PRIM1P49642 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.26□□□□□ -1.73
PRIM1P49642 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.26□□□□□ -1.73
PRIM1P49642 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.26□□□□□ -1.73
PRIM1P49642 Y_RNA.10-201ENST00000362371 110 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 RNU6-349P-201ENST00000362402 107 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 RNU1-72P-201ENST00000362976 153 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 RNU1-133P-201ENST00000364867 167 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 MIR515-2-201ENST00000384883 83 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 MIR515-1-201ENST00000384884 83 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 RNU6-965P-201ENST00000516721 96 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.26□□□□□ -1.73
PRIM1P49642 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.26□□□□□ -1.73
PRIM1P49642 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.26□□□□□ -1.73
PRIM1P49642 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PRIM1P49642 AL162726.3-218ENST00000636401 95 ntBASIC4.26□□□□□ -1.73
PRIM1P49642 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.26□□□□□ -1.73
PRIM1P49642 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.26□□□□□ -1.73
PRIM1P49642 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRIM1P49642 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRIM1P49642 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRIM1P49642 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PRIM1P49642 AL035425.3-201ENST00000564206 4996 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRIM1P49642 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PRIM1P49642 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
PRIM1P49642 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.25□□□□□ -1.73
PRIM1P49642 MIR449A-201ENST00000362113 91 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 SNORA63D-201ENST00000364359 132 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 Y_RNA.265-201ENST00000364677 108 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 MIR548O-201ENST00000408583 114 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 AL161788.1-201ENST00000441805 169 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.25□□□□□ -1.73
PRIM1P49642 RNU1-131P-201ENST00000458943 161 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 RNU7-164P-201ENST00000459221 62 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.25□□□□□ -1.73
PRIM1P49642 RNU6-830P-201ENST00000516353 107 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRIM1P49642 MIR3683-201ENST00000580847 82 ntBASIC4.25□□□□□ -1.73
PRIM1P49642 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRIM1P49642 RNU1-70P-201ENST00000362618 164 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 SNORD14E-201ENST00000364009 85 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 RNA5SP139-201ENST00000364340 117 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 AL159169.1-201ENST00000421119 127 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.24□□□□□ -1.73
PRIM1P49642 AC006989.1-201ENST00000427212 131 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 AL353689.1-201ENST00000438895 199 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 RNU6-1291P-201ENST00000516591 104 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 RNU1-142P-201ENST00000516682 145 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 UBL5P2-201ENST00000583788 219 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 AC025521.1-201ENST00000621624 286 ntBASIC4.24□□□□□ -1.73
PRIM1P49642 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PRIM1P49642 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
PRIM1P49642 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRIM1P49642 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PRIM1P49642 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms