Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SLC6A12P48065 MIR335-201ENST00000362173 94 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 SNORA27.1-201ENST00000362604 124 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 MTCO1P5-201ENST00000433573 344 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 HMGN2P34-201ENST00000437647 269 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.69□□□□□ -2.14
SLC6A12P48065 SUB1P4-201ENST00000566062 339 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 AC024614.2-201ENST00000577584 372 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 AL353149.1-201ENST00000610667 244 ntBASIC1.69□□□□□ -2.14
SLC6A12P48065 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SLC6A12P48065 AL159152.1-201ENST00000635019 2587 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.68□□□□□ -2.14
SLC6A12P48065 Y_RNA.14-201ENST00000362415 103 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 RNU4-80P-201ENST00000363200 141 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 SNORA33-201ENST00000363664 130 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 Y_RNA.288-201ENST00000364854 92 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 RNU6-1240P-201ENST00000365155 104 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 Y_RNA.569-201ENST00000384749 103 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SLC6A12P48065 SNORA40.18-201ENST00000391200 128 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 AC008134.1-201ENST00000420943 193 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 AC099677.2-201ENST00000436385 175 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 RNU6-1132P-201ENST00000459214 107 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.68□□□□□ -2.14
SLC6A12P48065 AC010598.1-201ENST00000510378 103 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 AC011406.1-201ENST00000512440 370 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 SERF1AP1-201ENST00000514575 187 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 RNU7-128P-201ENST00000517247 62 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 SUMO2P18-201ENST00000518873 252 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
SLC6A12P48065 AC062037.2-201ENST00000610137 73 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 MIR338-201ENST00000636369 67 ntBASIC1.68□□□□□ -2.14
SLC6A12P48065 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SLC6A12P48065 AL391987.6-201ENST00000305671 199 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SLC6A12P48065 snoU2-30.2-201ENST00000362805 70 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 Y_RNA.172-201ENST00000363765 102 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 Y_RNA.307-201ENST00000365022 117 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 RNU6-326P-201ENST00000365480 107 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 MIR873-201ENST00000401120 77 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 POLR2KP2-201ENST00000438155 177 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 RNU6-1041P-201ENST00000516254 102 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 RNU6-191P-201ENST00000516295 94 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 RNU2-31P-201ENST00000516954 155 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 SNORA44.1-201ENST00000517031 108 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
SLC6A12P48065 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC6A12P48065 RPL21P9-201ENST00000556149 474 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 MIR3684-201ENST00000579779 74 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC6A12P48065 AC006380.1-201ENST00000603598 186 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 AP000942.4-201ENST00000604811 241 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC6A12P48065 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC6A12P48065 U6.108-201ENST00000637764 58 ntBASIC1.67□□□□□ -2.14
SLC6A12P48065 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SLC6A12P48065 SNORD114-7-201ENST00000362520 77 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 RNU6-117P-201ENST00000365415 107 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 RPS26P55-201ENST00000471178 356 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 AC010409.1-201ENST00000487382 476 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 AC091959.1-201ENST00000495857 238 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 SCARNA24.2-201ENST00000516968 130 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 AC027419.1-201ENST00000522976 328 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 MIR4255-201ENST00000579351 72 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 AC006435.5-201ENST00000624486 112 ntBASIC1.66□□□□□ -2.14
SLC6A12P48065 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SLC6A12P48065 RNU6-661P-201ENST00000362409 107 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 RNU6-324P-201ENST00000363957 106 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 Y_RNA.447-201ENST00000384184 113 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 RNU6-417P-201ENST00000384712 107 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 CYCSP49-201ENST00000420810 319 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 ATP5J2P3-201ENST00000451550 258 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 SUMO1P2-201ENST00000452524 304 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 SNORA31.17-201ENST00000516953 127 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.65□□□□□ -2.15
SLC6A12P48065 MIR4643-201ENST00000577473 78 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 U2.14-201ENST00000615943 113 ntBASIC1.65□□□□□ -2.15
SLC6A12P48065 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.65□□□□□ -2.15
SLC6A12P48065 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.65□□□□□ -2.15
SLC6A12P48065 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
SLC6A12P48065 UBE2WP1-201ENST00000362030 340 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 RNU6-1266P-201ENST00000362794 105 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 RNU1-22P-201ENST00000363334 158 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 RNU1-96P-201ENST00000364163 162 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 Y_RNA.217-201ENST00000364214 105 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 Y_RNA.350-201ENST00000365409 98 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 SNORD116-13-201ENST00000384408 92 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 Y_RNA.539-201ENST00000384635 107 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 MIR30A-201ENST00000385092 71 ntBASIC1.64□□□□□ -2.15
SLC6A12P48065 MT-TG-201ENST00000387429 68 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms