Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNA5SP511-201ENST00000410487 115 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 AL162725.1-201ENST00000435405 301 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
APOBEC1P41238 TRBVB-201ENST00000477100 408 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 MTCO2P24-201ENST00000515611 426 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 RNU6-570P-201ENST00000517051 105 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 RNA5SP437-201ENST00000517249 129 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.7□□□□□ -2.14
APOBEC1P41238 MIR4713-201ENST00000582691 75 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 SNRPGP19-201ENST00000603826 189 ntBASIC1.7□□□□□ -2.14
APOBEC1P41238 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
APOBEC1P41238 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
APOBEC1P41238 RNU4-80P-201ENST00000363200 141 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 Y_RNA.133-201ENST00000363428 110 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 Y_RNA.368-201ENST00000365547 113 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 Y_RNA.418-201ENST00000384029 102 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 RNU6-514P-201ENST00000384208 107 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 RNU6-136P-201ENST00000384663 107 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 RNU6-360P-201ENST00000390944 104 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 RNU6-1203P-201ENST00000410703 110 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 HMGN2P19-201ENST00000425149 265 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 AC245047.3-201ENST00000429428 127 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.69□□□□□ -2.14
APOBEC1P41238 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 RPS27P1-201ENST00000450552 247 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 RN7SL274P-201ENST00000492268 272 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 MRPS17P9-201ENST00000511924 393 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 AC015720.1-201ENST00000565251 277 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 AC022254.1-201ENST00000567857 235 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
APOBEC1P41238 MIR3945-201ENST00000581853 98 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 AC022217.4-201ENST00000604389 163 ntBASIC1.69□□□□□ -2.14
APOBEC1P41238 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
APOBEC1P41238 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.68□□□□□ -2.14
APOBEC1P41238 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
APOBEC1P41238 SNORA25.1-201ENST00000362326 128 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 Y_RNA.376-201ENST00000365638 108 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 SNORD116-13-201ENST00000384408 92 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 MIR1302-3-201ENST00000408128 138 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 COX6CP10-201ENST00000416832 224 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 FTH1P12-201ENST00000432137 551 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 AL606517.2-201ENST00000442855 241 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 RPS20P10-201ENST00000451209 253 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 AC091021.1-201ENST00000468051 388 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 RPL23AP42-201ENST00000471152 471 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 UBL5P3-201ENST00000475112 231 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 RNU6-341P-201ENST00000516973 96 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 MIR4298-201ENST00000584380 73 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 AC091178.2-201ENST00000584401 117 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 AL512605.2-201ENST00000592972 256 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 AC005972.2-201ENST00000604690 348 ntBASIC1.68□□□□□ -2.14
APOBEC1P41238 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
APOBEC1P41238 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
APOBEC1P41238 Y_RNA.172-201ENST00000363765 102 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 Y_RNA.267-201ENST00000364679 109 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 Y_RNA.310-201ENST00000365063 113 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 Y_RNA.461-201ENST00000384263 103 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
APOBEC1P41238 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 RN7SKP200-201ENST00000410564 320 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 RNU2-40P-201ENST00000410833 196 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.67□□□□□ -2.14
APOBEC1P41238 MTCYBP9-201ENST00000431021 303 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 MTCO1P5-201ENST00000433573 344 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 snoU13.27-201ENST00000459278 104 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 RNU6-191P-201ENST00000516295 94 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 RNU6-1338P-201ENST00000516328 91 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 RNU6-1096P-201ENST00000517089 102 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 AC004832.4-201ENST00000608952 331 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 MIR8054-201ENST00000620877 86 ntBASIC1.67□□□□□ -2.14
APOBEC1P41238 Y_RNA.16-201ENST00000362421 102 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 RNA5SP489-201ENST00000410986 109 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 HSPE1P21-201ENST00000438283 308 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 MTND3P2-201ENST00000438452 342 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AC233266.1-201ENST00000454518 96 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 RN7SL429P-201ENST00000479090 223 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 RN7SL489P-201ENST00000486185 223 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 RN7SL327P-201ENST00000488659 223 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 SERF1AP1-201ENST00000514575 187 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AC136628.3-201ENST00000521868 290 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AL358944.1-201ENST00000528537 144 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AC110588.1-201ENST00000559699 137 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.66□□□□□ -2.14
APOBEC1P41238 MIR4709-201ENST00000577272 72 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AC242852.1-201ENST00000612151 96 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 RN7SL853P-201ENST00000617250 223 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 AC244015.1-201ENST00000622301 99 ntBASIC1.66□□□□□ -2.14
APOBEC1P41238 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
APOBEC1P41238 AL391987.6-201ENST00000305671 199 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU6-661P-201ENST00000362409 107 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU6-414P-201ENST00000363705 104 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 SNORA4.2-201ENST00000365313 147 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 Y_RNA.556-201ENST00000384677 113 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU6-440P-201ENST00000390882 105 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms