Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-322P-201ENST00000516010 103 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 RNU6-1337P-201ENST00000516525 95 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 RN7SKP88-201ENST00000516847 250 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXD13P35453 AC022616.4-201ENST00000522985 181 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 DNAJC19P9-201ENST00000555084 351 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.48□□□□□ -2.17
HOXD13P35453 MIR3664-201ENST00000579074 99 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 7SK.8-201ENST00000612110 250 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 7SK.11-201ENST00000615477 250 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 AC010205.1-201ENST00000616668 449 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 7SK.13-201ENST00000622040 250 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 AC091925.1-201ENST00000623204 462 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 AL008636.1-201ENST00000625038 1018 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 AL606534.2-204ENST00000635008 178 ntBASIC1.48□□□□□ -2.17
HOXD13P35453 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 RNU6-424P-201ENST00000384367 105 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HOXD13P35453 RNU6-710P-201ENST00000410424 105 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 RNA5SP511-201ENST00000410487 115 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 Y_RNA.621-201ENST00000411065 96 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 BTF3P4-201ENST00000418852 495 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXD13P35453 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
HOXD13P35453 CHEK2P4-201ENST00000450340 246 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 OR9P1P-201ENST00000496431 281 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 RNU7-12P-201ENST00000516030 62 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 RNU6-63P-201ENST00000516690 95 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 CYP3A52P-201ENST00000563326 91 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 MIR4795-201ENST00000584182 89 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 AC022441.3-201ENST00000605737 136 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 AL121655.1-201ENST00000605811 308 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 ZNF209P-201ENST00000593450 2304 ntBASIC1.47□□□□□ -2.17
HOXD13P35453 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
HOXD13P35453 RNU6-708P-201ENST00000384217 107 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 RNU6-1105P-201ENST00000384774 107 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 SNORA12.1-201ENST00000390873 148 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 AL354751.2-201ENST00000415471 210 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 AP1B1P2-201ENST00000416196 106 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 MTND4LP11-201ENST00000422184 280 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 AC024067.1-201ENST00000426199 223 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 CALM2P4-201ENST00000430810 426 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 U8.19-201ENST00000459095 133 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 MIR4778-201ENST00000577635 80 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
HOXD13P35453 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.46□□□□□ -2.18
HOXD13P35453 Y_RNA.197-201ENST00000364004 102 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 Y_RNA.462-201ENST00000384268 102 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 U8.16-201ENST00000391279 133 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 AF228730.4-201ENST00000421457 183 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 AC005042.3-201ENST00000453230 174 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 AC092991.1-201ENST00000477176 376 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 RNU6-237P-201ENST00000515985 71 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 AC106754.2-201ENST00000623006 233 ntBASIC1.45□□□□□ -2.18
HOXD13P35453 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.45□□□□□ -2.18
HOXD13P35453 RNU4-79P-201ENST00000362764 141 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 RNU6-1175P-201ENST00000365200 107 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 Y_RNA.579-201ENST00000390939 94 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 RNU6-482P-201ENST00000391068 107 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 RNU2-61P-201ENST00000411069 191 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 MCFD2P1-201ENST00000417812 300 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.44□□□□□ -2.18
HOXD13P35453 RNU6-436P-201ENST00000516171 114 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 RNU4-77P-201ENST00000516692 156 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 AC090049.2-201ENST00000550377 109 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.44□□□□□ -2.18
HOXD13P35453 MIR5188-201ENST00000583467 113 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 AP000942.3-201ENST00000603702 160 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 LARP7P1-201ENST00000605576 316 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 AC005592.1-201ENST00000566527 1640 ntBASIC1.44□□□□□ -2.18
HOXD13P35453 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
HOXD13P35453 Y_RNA.5-201ENST00000362334 102 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 RNU4-50P-201ENST00000364361 141 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 SNORA2.2-201ENST00000365473 135 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 AL451046.2-201ENST00000403074 277 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 RNU6-1199P-201ENST00000411249 104 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 MTATP6P23-201ENST00000440153 476 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 U8.20-201ENST00000459445 131 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 AC093852.1-201ENST00000503587 266 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 AL133255.1-201ENST00000606374 441 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 GHRLOS.1-201ENST00000610995 70 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 AC104985.2-201ENST00000620598 500 ntBASIC1.43□□□□□ -2.18
HOXD13P35453 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 Y_RNA.439-201ENST00000384119 94 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 Y_RNA.496-201ENST00000384444 101 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 Y_RNA.570-201ENST00000384750 101 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 RPS4XP11-201ENST00000446897 772 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 RNU6-475P-201ENST00000516073 104 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 AC005972.2-201ENST00000604690 348 ntBASIC1.42□□□□□ -2.18
HOXD13P35453 AC011373.1-201ENST00000607270 237 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms