Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RNU6-903P-201ENST00000391270 109 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 RNU6-195P-201ENST00000411352 109 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.72□□□□□ -2.52
CKS2P33552 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.72□□□□□ -2.52
CKS2P33552 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.72□□□□□ -2.52
CKS2P33552 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.72□□□□□ -2.52
CKS2P33552 AC010486.3-201ENST00000511602 785 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 MIR4752-201ENST00000579672 72 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 MIR2909-201ENST00000617113 69 ntBASIC-0.72□□□□□ -2.52
CKS2P33552 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 RNY4P34-201ENST00000364779 95 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 MIR1257-201ENST00000408490 117 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 AC090844.1-201ENST00000422019 156 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 MTCO1P5-201ENST00000433573 344 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 AC084290.1-201ENST00000434995 374 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 POLR2KP2-201ENST00000438155 177 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 PIGPP4-201ENST00000584447 307 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 AC016597.2-201ENST00000613256 341 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 AC240442.1-201ENST00000616055 283 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 MIR6740-201ENST00000618268 113 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 uc_338.22-201ENST00000622722 187 ntBASIC-0.73□□□□□ -2.53
CKS2P33552 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 MIR501-201ENST00000390204 84 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 AL590002.1-201ENST00000406554 418 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 SNRPGP10-201ENST00000432323 225 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 HMGN1P10-201ENST00000474557 553 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 AC005828.6-201ENST00000606610 232 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 MIR4791-201ENST00000607666 84 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 AC006504.8-201ENST00000621046 635 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 AC091304.10-201ENST00000641554 121 ntBASIC-0.74□□□□□ -2.53
CKS2P33552 SNORA63C-201ENST00000364578 129 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 MIR196A2-201ENST00000385189 110 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 MTCO2P27-201ENST00000420740 428 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 AC009961.2-201ENST00000435771 251 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.75□□□□□ -2.53
CKS2P33552 AC087499.4-201ENST00000448505 178 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 PRDX4P1-201ENST00000507189 574 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 CCDC34P1-201ENST00000507441 517 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 RNA5SP330-201ENST00000517096 96 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 RNA5SP47-201ENST00000517230 109 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 AC005730.3-201ENST00000583067 366 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 FAM157A-202ENST00000615155 405 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 U6.115-201ENST00000636045 103 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.75□□□□□ -2.53
CKS2P33552 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.76□□□□□ -2.53
CKS2P33552 RNU6-500P-201ENST00000362349 107 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 RNU6-541P-201ENST00000384709 110 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 RPL30P16-201ENST00000419341 429 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 AC073464.1-201ENST00000429823 534 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 RNU7-180P-201ENST00000459240 63 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
CKS2P33552 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.76□□□□□ -2.53
CKS2P33552 AC046134.1-201ENST00000514454 666 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 SNORA25.10-201ENST00000515926 124 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 AL157687.1-201ENST00000554853 619 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.76□□□□□ -2.53
CKS2P33552 AC087683.2-201ENST00000611384 326 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 HULC.1-201ENST00000612720 240 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 FTX_2.1-201ENST00000618816 94 ntBASIC-0.76□□□□□ -2.53
CKS2P33552 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.76□□□□□ -2.53
CKS2P33552 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 U8.17-201ENST00000391292 132 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
CKS2P33552 ELOCP21-201ENST00000412558 336 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 AL008987.1-201ENST00000415528 237 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.77□□□□□ -2.53
CKS2P33552 RNU6-830P-201ENST00000516353 107 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 RNU6-897P-201ENST00000517135 105 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 RNU2-60P-201ENST00000517290 128 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.77□□□□□ -2.53
CKS2P33552 MIR4645-201ENST00000583158 77 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 AL158063.1-201ENST00000615349 536 ntBASIC-0.77□□□□□ -2.53
CKS2P33552 AC106754.1-201ENST00000562632 1513 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 SNORD114-28-201ENST00000363610 72 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
CKS2P33552 RNU4-30P-201ENST00000410245 143 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 RPL30P10-201ENST00000488148 337 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 MTCO1P29-201ENST00000496868 288 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 RNU2-13P-201ENST00000515909 113 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 MIR548AD-201ENST00000584780 82 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 AC006380.1-201ENST00000603598 186 ntBASIC-0.78□□□□□ -2.53
CKS2P33552 SNORD49B-201ENST00000365172 72 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 SNORD38C-201ENST00000384381 69 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 RNU6-131P-201ENST00000391144 107 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.79□□□□□ -2.54
CKS2P33552 RNU6-284P-201ENST00000411105 106 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms