Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 MIR4423-201ENST00000580922 80 ntBASIC1.83□□□□□ -2.12
HOXC9P31274 MIR3660-201ENST00000584845 100 ntBASIC1.83□□□□□ -2.12
HOXC9P31274 AC022441.3-201ENST00000605737 136 ntBASIC1.83□□□□□ -2.12
HOXC9P31274 AL359075.3-201ENST00000613288 217 ntBASIC1.83□□□□□ -2.12
HOXC9P31274 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
HOXC9P31274 CENPCP1-201ENST00000533085 2578 ntBASIC1.83□□□□□ -2.12
HOXC9P31274 SNORA27.1-201ENST00000362604 124 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 Y_RNA.243-201ENST00000364481 109 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 Y_RNA.462-201ENST00000384268 102 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 Y_RNA.602-201ENST00000410535 92 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 RNA5SP100-201ENST00000410903 110 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 RNA5SP59-201ENST00000410922 110 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 RNU6-1199P-201ENST00000411249 104 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC9P31274 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 HMGN2P38-201ENST00000423806 265 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC245047.4-201ENST00000433189 144 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC005042.3-201ENST00000453230 174 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC010655.3-201ENST00000478818 450 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 MRPS35P2-201ENST00000508242 191 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXC9P31274 MIR4300-201ENST00000581016 96 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 MIR4719-201ENST00000585233 84 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AL355297.3-201ENST00000604082 446 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC007742.2-201ENST00000618226 398 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 U6.73-201ENST00000619194 103 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 AC010615.1-201ENST00000594254 1764 ntBASIC1.82□□□□□ -2.12
HOXC9P31274 Y_RNA.105-201ENST00000363182 111 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 RNU6-271P-201ENST00000363858 105 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 Y_RNA.183-201ENST00000363882 113 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 RNU6-1160P-201ENST00000384546 104 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 MIR515-2-201ENST00000384883 83 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 MIR515-1-201ENST00000384884 83 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 MIR873-201ENST00000401120 77 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 EBAG9P1-201ENST00000418955 543 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXC9P31274 RPS29P29-201ENST00000456396 171 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 AC023790.1-201ENST00000482174 347 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 AL163195.1-201ENST00000496941 348 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 AC006435.5-201ENST00000624486 112 ntBASIC1.81□□□□□ -2.12
HOXC9P31274 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HOXC9P31274 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC9P31274 SNORD113-8-201ENST00000363497 74 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 RNU6-112P-201ENST00000363599 104 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 Y_RNA.796-201ENST00000364268 102 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 Y_RNA.269-201ENST00000364685 89 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 Y_RNA.286-201ENST00000364813 102 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 Y_RNA.799-201ENST00000364992 102 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 RNU6-806P-201ENST00000365147 105 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 SNORD63-201ENST00000384262 68 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 RNU6-505P-201ENST00000384427 107 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 ELOCP20-201ENST00000422460 345 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 MTATP8P1-201ENST00000467115 207 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXC9P31274 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 AC097462.1-201ENST00000514125 324 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 SNORA31.17-201ENST00000516953 127 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 RNU7-172P-201ENST00000517125 64 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXC9P31274 AC005828.6-201ENST00000606610 232 ntBASIC1.8□□□□□ -2.12
HOXC9P31274 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HOXC9P31274 Y_RNA.19-201ENST00000362462 99 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU1-22P-201ENST00000363334 158 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 Y_RNA.152-201ENST00000363578 100 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 Y_RNA.214-201ENST00000364201 112 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 Y_RNA.329-201ENST00000365209 107 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU6-102P-201ENST00000384485 104 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU6-376P-201ENST00000384731 106 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 MIR520A-201ENST00000384862 85 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNA5SP109-201ENST00000391010 116 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU6-121P-201ENST00000410525 99 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 AL390729.2-201ENST00000416137 156 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC9P31274 SUMO1P2-201ENST00000452524 304 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RPS26P55-201ENST00000471178 356 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU6-436P-201ENST00000516171 114 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU6-63P-201ENST00000516690 95 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 Y_RNA.720-201ENST00000517166 92 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNU7-128P-201ENST00000517247 62 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 RNA5SP437-201ENST00000517249 129 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC9P31274 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC9P31274 MIR3145-201ENST00000580727 82 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC9P31274 AC008737.2-201ENST00000599446 118 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 AL353621.2-201ENST00000605340 133 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 U6.108-201ENST00000637764 58 ntBASIC1.79□□□□□ -2.12
HOXC9P31274 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.78□□□□□ -2.12
HOXC9P31274 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.78□□□□□ -2.12
HOXC9P31274 Y_RNA.26-201ENST00000362539 101 ntBASIC1.78□□□□□ -2.12
HOXC9P31274 RNU6-770P-201ENST00000363929 105 ntBASIC1.78□□□□□ -2.12
HOXC9P31274 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.78□□□□□ -2.12
HOXC9P31274 RNU6-136P-201ENST00000384663 107 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms