Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HOXA13P31271 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
HOXA13P31271 AC010615.1-201ENST00000594254 1764 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXA13P31271 RNU6-1019P-201ENST00000364424 107 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AL117342.1-201ENST00000404861 406 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 RNU4-62P-201ENST00000410125 130 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
HOXA13P31271 TRBVB-201ENST00000477100 408 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AC010409.1-201ENST00000487382 476 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 RNU1-142P-201ENST00000516682 145 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXA13P31271 AC023157.2-201ENST00000540596 141 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AC084364.2-201ENST00000546924 395 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXA13P31271 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 MIR4713-201ENST00000582691 75 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AC010900.2-201ENST00000604508 210 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AC022441.3-201ENST00000605737 136 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 AL353149.1-201ENST00000610667 244 ntBASIC1.85□□□□□ -2.11
HOXA13P31271 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HOXA13P31271 MIR410-201ENST00000362222 80 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 Y_RNA.124-201ENST00000363339 93 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 SNORA33-201ENST00000363664 130 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 Y_RNA.237-201ENST00000364439 102 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 Y_RNA.287-201ENST00000364853 94 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 Y_RNA.331-201ENST00000365267 102 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 Y_RNA.418-201ENST00000384029 102 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 SNORD63-201ENST00000384262 68 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 MIR520A-201ENST00000384862 85 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 RNU6-155P-201ENST00000516347 100 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 RNU2-12P-201ENST00000517216 168 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 AL137100.2-201ENST00000555786 315 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXA13P31271 AC011373.1-201ENST00000607270 237 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 uc_338.20-201ENST00000621563 178 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 AC127459.3-201ENST00000624328 466 ntBASIC1.84□□□□□ -2.11
HOXA13P31271 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
HOXA13P31271 SNORD115-30-201ENST00000364117 82 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 Y_RNA.307-201ENST00000365022 117 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 SNORA72.2-201ENST00000365028 127 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 MIR515-2-201ENST00000384883 83 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 MIR515-1-201ENST00000384884 83 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 SNORA67.5-201ENST00000391036 107 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 RPS27P22-201ENST00000478056 241 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 RPL36AP21-201ENST00000490372 323 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 SCARNA24.2-201ENST00000516968 130 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 DEFB117-201ENST00000602356 141 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 AL359075.3-201ENST00000613288 217 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 U4.1-201ENST00000620349 87 ntBASIC1.83□□□□□ -2.12
HOXA13P31271 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXA13P31271 Y_RNA.230-201ENST00000364348 109 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 RNU6-702P-201ENST00000364982 107 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 Y_RNA.462-201ENST00000384268 102 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 Y_RNA.477-201ENST00000384352 108 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 RNU6-21P-201ENST00000384710 107 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 AL355796.1-201ENST00000406706 323 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 MIR1302-6-201ENST00000408466 90 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 RNU2-54P-201ENST00000410299 190 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 AC009310.1-201ENST00000414414 451 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXA13P31271 AL135790.2-201ENST00000437701 267 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 SNORD127-201ENST00000458892 86 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 SNORD65B-201ENST00000459126 73 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 RNU6-1338P-201ENST00000516328 91 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 AC012433.1-201ENST00000588916 398 ntBASIC1.82□□□□□ -2.12
HOXA13P31271 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.81□□□□□ -2.12
HOXA13P31271 RNU4-80P-201ENST00000363200 141 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 Y_RNA.172-201ENST00000363765 102 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 RNU6-290P-201ENST00000365212 101 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 Y_RNA.383-201ENST00000383855 97 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 RNU6-1310P-201ENST00000384153 107 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 Y_RNA.518-201ENST00000384552 113 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HOXA13P31271 MIR1323-201ENST00000408090 73 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 MIR1302-3-201ENST00000408128 138 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 RNU5A-5P-201ENST00000411054 116 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 BTF3P4-201ENST00000418852 495 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXA13P31271 AC245047.4-201ENST00000433189 144 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 HSPE1P9-201ENST00000440046 311 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 AC069257.2-201ENST00000441819 155 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXA13P31271 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.81□□□□□ -2.12
HOXA13P31271 RPL21P9-201ENST00000556149 474 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 U6.115-201ENST00000636045 103 ntBASIC1.81□□□□□ -2.12
HOXA13P31271 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXA13P31271 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HOXA13P31271 RNU1-42P-201ENST00000364033 160 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 Y_RNA.329-201ENST00000365209 107 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 RNU6-407P-201ENST00000365280 104 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms