Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SNORD114-7-201ENST00000362520 77 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU6-1188P-201ENST00000363795 107 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU6-117P-201ENST00000365415 107 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 SNORA2.2-201ENST00000365473 135 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU6-926P-201ENST00000384075 107 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU6-310P-201ENST00000384655 107 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU5A-5P-201ENST00000411054 116 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.04□□□□□ -2.24
PTPN6P29350 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.04□□□□□ -2.24
PTPN6P29350 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU6-63P-201ENST00000516690 95 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 RNU7-4P-201ENST00000516961 62 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 SNORA70.22-201ENST00000517160 124 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 AC144568.1-201ENST00000520139 137 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 AL358944.1-201ENST00000528537 144 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
PTPN6P29350 AC004467.1-201ENST00000615678 330 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 AC087588.2-201ENST00000617667 426 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 AL391516.1-201ENST00000554380 2449 ntBASIC1.04□□□□□ -2.24
PTPN6P29350 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
PTPN6P29350 SNORD114-22-201ENST00000365423 72 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 Y_RNA.505-201ENST00000384489 102 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.03□□□□□ -2.24
PTPN6P29350 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 snoU13.18-201ENST00000459483 104 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 COX6CP14-201ENST00000469580 174 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 SNORA31.2-201ENST00000516019 134 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 SNORA70.12-201ENST00000516084 153 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 RNU6-917P-201ENST00000516294 104 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 AC006380.1-201ENST00000603598 186 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 AL357312.1-201ENST00000603879 298 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.03□□□□□ -2.24
PTPN6P29350 AC022306.2-201ENST00000617563 647 ntBASIC1.03□□□□□ -2.24
PTPN6P29350 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.03□□□□□ -2.24
PTPN6P29350 SNORD41-201ENST00000386967 70 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 Y_RNA.599-201ENST00000410489 109 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 RNU6-1304P-201ENST00000411374 106 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 FCF1P4-201ENST00000448326 183 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 RPL39P39-201ENST00000455840 151 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 SNORA4-201ENST00000584302 138 ntBASIC1.02□□□□□ -2.25
PTPN6P29350 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PTPN6P29350 RNU6-961P-201ENST00000363893 105 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 SNORD115-30-201ENST00000364117 82 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RNU4-41P-201ENST00000364426 143 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RNU6-890P-201ENST00000384121 107 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RNY1P14-201ENST00000384426 108 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RNU6-910P-201ENST00000390844 107 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 Y_RNA.605-201ENST00000410577 105 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 Y_RNA.621-201ENST00000411065 96 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 AC104332.1-201ENST00000440471 797 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 ELOCP24-201ENST00000456370 334 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RPL30P15-201ENST00000457129 321 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 Y_RNA.653-201ENST00000459091 95 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RNU7-169P-201ENST00000459456 61 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 AC048334.1-201ENST00000477975 159 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
PTPN6P29350 RNU6-559P-201ENST00000516151 98 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 RNU2-12P-201ENST00000517216 168 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.01□□□□□ -2.25
PTPN6P29350 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.01□□□□□ -2.25
PTPN6P29350 AC136932.1-201ENST00000574771 208 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
PTPN6P29350 AL078603.1-201ENST00000603824 313 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 AC133104.2-201ENST00000615272 193 ntBASIC1.01□□□□□ -2.25
PTPN6P29350 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1□□□□□ -2.25
PTPN6P29350 MIRLET7C-201ENST00000362160 84 ntBASIC1□□□□□ -2.25
PTPN6P29350 MIR96-201ENST00000362288 78 ntBASIC1□□□□□ -2.25
PTPN6P29350 RNU4-79P-201ENST00000362764 141 ntBASIC1□□□□□ -2.25
PTPN6P29350 RNA5SP511-201ENST00000410487 115 ntBASIC1□□□□□ -2.25
PTPN6P29350 Z98949.2-201ENST00000440996 144 ntBASIC1□□□□□ -2.25
PTPN6P29350 PRDX4P1-201ENST00000507189 574 ntBASIC1□□□□□ -2.25
PTPN6P29350 RNU6-470P-201ENST00000515954 104 ntBASIC1□□□□□ -2.25
PTPN6P29350 RNU6-1337P-201ENST00000516525 95 ntBASIC1□□□□□ -2.25
PTPN6P29350 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
PTPN6P29350 AL117336.2-201ENST00000602435 335 ntBASIC1□□□□□ -2.25
PTPN6P29350 AC113139.1-201ENST00000605049 239 ntBASIC1□□□□□ -2.25
PTPN6P29350 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PTPN6P29350 RNU6-163P-201ENST00000384396 106 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 MIR891A-201ENST00000401237 79 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 RNU6-1054P-201ENST00000411293 104 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AL354751.2-201ENST00000415471 210 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AC098614.3-201ENST00000438957 440 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.99□□□□□ -2.25
PTPN6P29350 RNU6-1116P-201ENST00000517269 99 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 AC025253.1-201ENST00000613623 543 ntBASIC0.99□□□□□ -2.25
PTPN6P29350 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
PTPN6P29350 SNORD68-201ENST00000363214 84 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 RNY3P11-201ENST00000364153 102 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 RNU1-93P-201ENST00000364704 169 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 Y_RNA.314-201ENST00000365114 102 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 Y_RNA.361-201ENST00000365515 120 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
PTPN6P29350 RNY3P4-201ENST00000384428 101 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms