Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
RXRBP28702 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.47□□□□□ -1.85
RXRBP28702 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.46□□□□□ -1.86
RXRBP28702 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
RXRBP28702 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RXRBP28702 SNORD116-21-201ENST00000384507 92 ntBASIC3.46□□□□□ -1.86
RXRBP28702 MIR499A-201ENST00000384903 122 ntBASIC3.46□□□□□ -1.86
RXRBP28702 RNA5SP496-201ENST00000391240 109 ntBASIC3.46□□□□□ -1.86
RXRBP28702 RNU2-55P-201ENST00000411146 174 ntBASIC3.46□□□□□ -1.86
RXRBP28702 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.46□□□□□ -1.86
RXRBP28702 AL441985.1-201ENST00000457727 251 ntBASIC3.46□□□□□ -1.86
RXRBP28702 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.46□□□□□ -1.86
RXRBP28702 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.46□□□□□ -1.86
RXRBP28702 RNU6-781P-201ENST00000516377 101 ntBASIC3.46□□□□□ -1.86
RXRBP28702 RNU6-711P-201ENST00000517255 106 ntBASIC3.46□□□□□ -1.86
RXRBP28702 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.86
RXRBP28702 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.46□□□□□ -1.86
RXRBP28702 AC005972.2-201ENST00000604690 348 ntBASIC3.46□□□□□ -1.86
RXRBP28702 AC026241.1-201ENST00000517873 2142 ntBASIC3.46□□□□□ -1.86
RXRBP28702 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.45□□□□□ -1.86
RXRBP28702 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RXRBP28702 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RXRBP28702 SNORA64-201ENST00000384674 134 ntBASIC3.45□□□□□ -1.86
RXRBP28702 MIR518E-201ENST00000385252 88 ntBASIC3.45□□□□□ -1.86
RXRBP28702 RNU1-101P-201ENST00000391171 127 ntBASIC3.45□□□□□ -1.86
RXRBP28702 SNORD65B-201ENST00000459126 73 ntBASIC3.45□□□□□ -1.86
RXRBP28702 AC090515.1-201ENST00000465295 476 ntBASIC3.45□□□□□ -1.86
RXRBP28702 RN7SL633P-201ENST00000488974 297 ntBASIC3.45□□□□□ -1.86
RXRBP28702 RPL23AP54-201ENST00000495129 419 ntBASIC3.45□□□□□ -1.86
RXRBP28702 AC133485.4-201ENST00000561835 220 ntBASIC3.45□□□□□ -1.86
RXRBP28702 AC138907.4-201ENST00000570107 226 ntBASIC3.45□□□□□ -1.86
RXRBP28702 snoZ196.1-201ENST00000625269 89 ntBASIC3.45□□□□□ -1.86
RXRBP28702 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RXRBP28702 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.44□□□□□ -1.86
RXRBP28702 AC008264.2-201ENST00000610193 3731 ntBASIC3.44□□□□□ -1.86
RXRBP28702 MAPK10-322ENST00000641485 4530 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
RXRBP28702 SNORA14A-201ENST00000364773 135 ntBASIC3.44□□□□□ -1.86
RXRBP28702 Y_RNA.432-201ENST00000384087 111 ntBASIC3.44□□□□□ -1.86
RXRBP28702 MIR181A2-201ENST00000384863 110 ntBASIC3.44□□□□□ -1.86
RXRBP28702 SNORA79-201ENST00000408376 140 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.44□□□□□ -1.86
RXRBP28702 AC011753.1-201ENST00000451001 220 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AC112771.1-201ENST00000463581 102 ntBASIC3.44□□□□□ -1.86
RXRBP28702 RPS26P45-201ENST00000471748 340 ntBASIC3.44□□□□□ -1.86
RXRBP28702 RNU6-1061P-201ENST00000516530 99 ntBASIC3.44□□□□□ -1.86
RXRBP28702 RNU6-63P-201ENST00000516690 95 ntBASIC3.44□□□□□ -1.86
RXRBP28702 RNU7-116P-201ENST00000516940 62 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AC079598.5-201ENST00000547460 117 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AC131055.1-201ENST00000584626 316 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AC097639.2-201ENST00000603159 172 ntBASIC3.44□□□□□ -1.86
RXRBP28702 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.44□□□□□ -1.86
RXRBP28702 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RXRBP28702 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
RXRBP28702 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RXRBP28702 RNU6-309P-201ENST00000364573 106 ntBASIC3.43□□□□□ -1.86
RXRBP28702 RPL21P3-201ENST00000395517 478 ntBASIC3.43□□□□□ -1.86
RXRBP28702 AL603914.1-201ENST00000401964 204 ntBASIC3.43□□□□□ -1.86
RXRBP28702 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
RXRBP28702 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.43□□□□□ -1.86
RXRBP28702 RNA5SP217-201ENST00000515959 91 ntBASIC3.43□□□□□ -1.86
RXRBP28702 Y_RNA.694-201ENST00000516677 117 ntBASIC3.43□□□□□ -1.86
RXRBP28702 AC024614.2-201ENST00000577584 372 ntBASIC3.43□□□□□ -1.86
RXRBP28702 AC091178.2-201ENST00000584401 117 ntBASIC3.43□□□□□ -1.86
RXRBP28702 AL049861.1-201ENST00000603130 150 ntBASIC3.43□□□□□ -1.86
RXRBP28702 RPL17P51-201ENST00000605218 238 ntBASIC3.43□□□□□ -1.86
RXRBP28702 AC008555.8-201ENST00000623602 2168 ntBASIC3.43□□□□□ -1.86
RXRBP28702 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RXRBP28702 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RXRBP28702 Y_RNA.91-201ENST00000363042 107 ntBASIC3.42□□□□□ -1.86
RXRBP28702 RNU4-41P-201ENST00000364426 143 ntBASIC3.42□□□□□ -1.86
RXRBP28702 MIR548A3-201ENST00000385297 97 ntBASIC3.42□□□□□ -1.86
RXRBP28702 MIR147B-201ENST00000390185 80 ntBASIC3.42□□□□□ -1.86
RXRBP28702 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
RXRBP28702 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.42□□□□□ -1.86
RXRBP28702 MTCO1P44-201ENST00000441935 243 ntBASIC3.42□□□□□ -1.86
RXRBP28702 AC010531.2-201ENST00000465012 153 ntBASIC3.42□□□□□ -1.86
RXRBP28702 SNORD59.2-201ENST00000516873 68 ntBASIC3.42□□□□□ -1.86
RXRBP28702 uc_338.14-201ENST00000613162 166 ntBASIC3.42□□□□□ -1.86
RXRBP28702 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.42□□□□□ -1.86
RXRBP28702 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RXRBP28702 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RXRBP28702 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RXRBP28702 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
RXRBP28702 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
RXRBP28702 Y_RNA.116-201ENST00000363292 103 ntBASIC3.41□□□□□ -1.86
RXRBP28702 RNU1-105P-201ENST00000363470 161 ntBASIC3.41□□□□□ -1.86
RXRBP28702 RNU6-117P-201ENST00000365415 107 ntBASIC3.41□□□□□ -1.86
RXRBP28702 Y_RNA.495-201ENST00000384435 112 ntBASIC3.41□□□□□ -1.86
RXRBP28702 RNA5SP252-201ENST00000391131 119 ntBASIC3.41□□□□□ -1.86
RXRBP28702 RPL39P40-201ENST00000445481 146 ntBASIC3.41□□□□□ -1.86
RXRBP28702 RNU7-57P-201ENST00000459540 60 ntBASIC3.41□□□□□ -1.86
RXRBP28702 AC010598.1-201ENST00000510378 103 ntBASIC3.41□□□□□ -1.86
RXRBP28702 Y_RNA.690-201ENST00000516603 95 ntBASIC3.41□□□□□ -1.86
RXRBP28702 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.41□□□□□ -1.86
RXRBP28702 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RXRBP28702 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
RXRBP28702 MIR450A1-201ENST00000362262 91 ntBASIC3.4□□□□□ -1.87
RXRBP28702 MIR337-201ENST00000362281 93 ntBASIC3.4□□□□□ -1.87
RXRBP28702 RNU1-91P-201ENST00000364746 163 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms