Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.12□□□□□ -1.91
ERCC3P19447 AC068700.1-201ENST00000565862 3754 ntBASIC3.12□□□□□ -1.91
ERCC3P19447 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERCC3P19447 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERCC3P19447 RNU6-1080P-201ENST00000383982 107 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 MIR1283-2-201ENST00000408621 87 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 AC011753.1-201ENST00000451001 220 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.11□□□□□ -1.91
ERCC3P19447 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC3P19447 AC096725.1-201ENST00000514266 313 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 RNA5SP148-201ENST00000516527 94 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 SNORA31.15-201ENST00000516771 132 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 RNU7-128P-201ENST00000517247 62 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 CBX3P4-201ENST00000538909 354 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 MIR4308-201ENST00000580634 81 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 MIR3605-201ENST00000583214 100 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 AC010297.1-201ENST00000623948 149 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 U6.108-201ENST00000637764 58 ntBASIC3.11□□□□□ -1.91
ERCC3P19447 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERCC3P19447 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.11□□□□□ -1.91
ERCC3P19447 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ERCC3P19447 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ERCC3P19447 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
ERCC3P19447 MIR1261-201ENST00000408659 82 ntBASIC3.1□□□□□ -1.91
ERCC3P19447 RNU2-7P-201ENST00000410794 178 ntBASIC3.1□□□□□ -1.91
ERCC3P19447 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.1□□□□□ -1.91
ERCC3P19447 AC245047.8-201ENST00000456455 284 ntBASIC3.1□□□□□ -1.91
ERCC3P19447 RNU7-94P-201ENST00000459576 63 ntBASIC3.1□□□□□ -1.91
ERCC3P19447 RNU6-1007P-201ENST00000516586 107 ntBASIC3.1□□□□□ -1.91
ERCC3P19447 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ERCC3P19447 AC022513.1-201ENST00000624512 117 ntBASIC3.1□□□□□ -1.91
ERCC3P19447 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ERCC3P19447 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ERCC3P19447 Y_RNA.150-201ENST00000363562 102 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 SNORA67.4-201ENST00000384688 142 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 MIR626-201ENST00000385032 94 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 MIR1278-201ENST00000408753 81 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 RNU2-64P-201ENST00000411315 191 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.09□□□□□ -1.91
ERCC3P19447 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 RNU2-56P-201ENST00000516826 190 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 MIR4529-201ENST00000578110 78 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 AC245884.12-201ENST00000615364 59 ntBASIC3.09□□□□□ -1.91
ERCC3P19447 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
ERCC3P19447 Y_RNA.7-201ENST00000362352 102 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ERCC3P19447 AC008413.1-201ENST00000511864 177 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 RNVU1-2-201ENST00000516326 135 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 RNU6-861P-201ENST00000516745 106 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 AC084364.2-201ENST00000546924 395 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 AC104984.5-201ENST00000586878 94 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 AC098479.1-201ENST00000609225 154 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 JPX_2.1-201ENST00000614161 69 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 MIR6715A-201ENST00000615929 79 ntBASIC3.08□□□□□ -1.92
ERCC3P19447 MIR26A1-201ENST00000362205 77 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 Y_RNA.182-201ENST00000363880 111 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 RNU6-1019P-201ENST00000364424 107 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 MIR526A2-201ENST00000390198 65 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 RNA5SP109-201ENST00000391010 116 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 RNU6-918P-201ENST00000391219 106 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 MLLT10P1-201ENST00000418346 262 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.07□□□□□ -1.92
ERCC3P19447 Y_RNA.797-201ENST00000515977 94 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.07□□□□□ -1.92
ERCC3P19447 AC072026.1-201ENST00000605023 201 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 AL590808.1-201ENST00000618696 141 ntBASIC3.07□□□□□ -1.92
ERCC3P19447 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ERCC3P19447 Y_RNA.203-201ENST00000364106 102 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 Y_RNA.233-201ENST00000364407 101 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 Y_RNA.238-201ENST00000364441 102 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 RNU6-209P-201ENST00000384118 107 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 Y_RNA.571-201ENST00000384753 98 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 MIR562-201ENST00000384894 95 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 AL512604.1-201ENST00000404812 257 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 RNA5SP501-201ENST00000410990 112 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 AC245047.3-201ENST00000429428 127 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 RNU6-341P-201ENST00000516973 96 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.06□□□□□ -1.92
ERCC3P19447 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.06□□□□□ -1.92
ERCC3P19447 MIR203B-201ENST00000636080 86 ntBASIC3.06□□□□□ -1.92
ERCC3P19447 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ERCC3P19447 AC100821.1-201ENST00000523153 2479 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ERCC3P19447 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
ERCC3P19447 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ERCC3P19447 AC023449.1-201ENST00000454464 154 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 RNA5SP57-201ENST00000459463 123 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 RN7SKP164-201ENST00000516138 266 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 RNU1-41P-201ENST00000516161 162 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 RNU1-48P-201ENST00000516400 162 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 SNORA31.25-201ENST00000517242 134 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 RPL23AP91-201ENST00000569211 455 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 AC091178.2-201ENST00000584401 117 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.05□□□□□ -1.92
ERCC3P19447 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.05□□□□□ -1.92
ERCC3P19447 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.05□□□□□ -1.92
ERCC3P19447 ICE2P2-201ENST00000483823 2787 ntBASIC3.05□□□□□ -1.92
ERCC3P19447 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
ERCC3P19447 snoU2_19.4-201ENST00000364329 80 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms