Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 CYP2C59P-201ENST00000457790 269 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXD8P13378 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXD8P13378 PRELID2P1-201ENST00000552837 301 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 uc_338.28-201ENST00000612082 187 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD8P13378 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD8P13378 Y_RNA.495-201ENST00000384435 112 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 SNORA12.1-201ENST00000390873 148 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 U6atac.2-201ENST00000408644 118 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 SNRPGP10-201ENST00000432323 225 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 MRPS17P9-201ENST00000511924 393 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 RNA5SP356-201ENST00000515972 94 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 SNORD59.2-201ENST00000516873 68 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXD8P13378 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
HOXD8P13378 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXD8P13378 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXD8P13378 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXD8P13378 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD8P13378 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXD8P13378 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HOXD8P13378 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
HOXD8P13378 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD8P13378 Y_RNA.116-201ENST00000363292 103 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 RNU6-1164P-201ENST00000364428 107 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 MIR1261-201ENST00000408659 82 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 AC123900.1-201ENST00000420390 96 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 RN7SL20P-201ENST00000488827 297 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 HMGN1P7-201ENST00000491722 313 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 RNU6-237P-201ENST00000515985 71 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 RNU6-412P-201ENST00000516434 106 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 RNU6-1291P-201ENST00000516591 104 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD8P13378 ELOCP29-201ENST00000588193 334 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 AC107294.3-201ENST00000609211 526 ntBASIC3.33□□□□□ -1.88
HOXD8P13378 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXD8P13378 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD8P13378 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXD8P13378 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXD8P13378 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD8P13378 Y_RNA.66-201ENST00000362862 102 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 CD24P4-201ENST00000382840 243 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 SNORA1-201ENST00000384107 130 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 MTCO1P44-201ENST00000441935 243 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 RPS29P24-201ENST00000486345 171 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 RNA5SP367-201ENST00000516557 118 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 RNU6-856P-201ENST00000516959 98 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 GTF3AP2-201ENST00000557014 266 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 AC007229.1-201ENST00000590455 412 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
HOXD8P13378 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HOXD8P13378 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXD8P13378 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXD8P13378 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HOXD8P13378 AP003122.5-201ENST00000527668 3766 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD8P13378 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HOXD8P13378 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD8P13378 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXD8P13378 Y_RNA.267-201ENST00000364679 109 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 Y_RNA.528-201ENST00000384575 108 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 AC007064.1-201ENST00000412238 351 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 AC105272.1-201ENST00000438604 198 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD8P13378 RN7SKP132-201ENST00000516001 208 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXD8P13378 MIR5582-201ENST00000579697 68 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.31□□□□□ -1.88
HOXD8P13378 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HOXD8P13378 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HOXD8P13378 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXD8P13378 RNA5SP125-201ENST00000364843 120 ntBASIC3.3□□□□□ -1.88
HOXD8P13378 RNU2-63P-201ENST00000410792 194 ntBASIC3.3□□□□□ -1.88
HOXD8P13378 AC018634.1-201ENST00000437554 401 ntBASIC3.3□□□□□ -1.88
HOXD8P13378 Y_RNA.677-201ENST00000516401 85 ntBASIC3.3□□□□□ -1.88
HOXD8P13378 Y_RNA.714-201ENST00000517065 90 ntBASIC3.3□□□□□ -1.88
HOXD8P13378 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
HOXD8P13378 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXD8P13378 ICE2P2-201ENST00000483823 2787 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HOXD8P13378 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD8P13378 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HOXD8P13378 RNU1-23P-201ENST00000363361 144 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 Y_RNA.242-201ENST00000364473 110 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 Y_RNA.253-201ENST00000364562 112 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 RNY4P30-201ENST00000410216 95 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 RNU6-1328P-201ENST00000410938 106 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 AC006483.1-201ENST00000487308 313 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 NDUFA4P2-201ENST00000489989 244 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 AC023141.11-201ENST00000508864 202 ntBASIC3.29□□□□□ -1.88
HOXD8P13378 AC093259.1-201ENST00000509755 300 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms