Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 Y_RNA.478-201ENST00000384358 107 ntBASIC1.82□□□□□ -2.12
CDH1P12830 SNORD116-13-201ENST00000384408 92 ntBASIC1.82□□□□□ -2.12
CDH1P12830 Y_RNA.489-201ENST00000384410 101 ntBASIC1.82□□□□□ -2.12
CDH1P12830 MIR597-201ENST00000384968 97 ntBASIC1.82□□□□□ -2.12
CDH1P12830 SNORA40.19-201ENST00000390846 128 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU6-855P-201ENST00000410395 104 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU6-651P-201ENST00000411040 105 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNA5SP270-201ENST00000411361 118 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AC024067.1-201ENST00000426199 223 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
CDH1P12830 YWHAEP4-201ENST00000505390 198 ntBASIC1.82□□□□□ -2.12
CDH1P12830 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AC097462.1-201ENST00000514125 324 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU7-193P-201ENST00000516723 65 ntBASIC1.82□□□□□ -2.12
CDH1P12830 SNORA31.25-201ENST00000517242 134 ntBASIC1.82□□□□□ -2.12
CDH1P12830 RNU7-128P-201ENST00000517247 62 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AL137100.2-201ENST00000555786 315 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AL512605.2-201ENST00000592972 256 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
CDH1P12830 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.82□□□□□ -2.12
CDH1P12830 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
CDH1P12830 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDH1P12830 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CDH1P12830 AL356292.1-201ENST00000283110 373 ntBASIC1.81□□□□□ -2.12
CDH1P12830 RNU6-862P-201ENST00000362804 105 ntBASIC1.81□□□□□ -2.12
CDH1P12830 Y_RNA.117-201ENST00000363294 101 ntBASIC1.81□□□□□ -2.12
CDH1P12830 SNORA20.1-201ENST00000364790 130 ntBASIC1.81□□□□□ -2.12
CDH1P12830 Y_RNA.476-201ENST00000384347 108 ntBASIC1.81□□□□□ -2.12
CDH1P12830 RNA5SP467-201ENST00000391274 118 ntBASIC1.81□□□□□ -2.12
CDH1P12830 AC019129.1-201ENST00000403786 261 ntBASIC1.81□□□□□ -2.12
CDH1P12830 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.81□□□□□ -2.12
CDH1P12830 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
CDH1P12830 HMGN2P3-201ENST00000433603 273 ntBASIC1.81□□□□□ -2.12
CDH1P12830 HMGN2P5-201ENST00000436882 273 ntBASIC1.81□□□□□ -2.12
CDH1P12830 UBL5P3-201ENST00000475112 231 ntBASIC1.81□□□□□ -2.12
CDH1P12830 AC010409.1-201ENST00000487382 476 ntBASIC1.81□□□□□ -2.12
CDH1P12830 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.81□□□□□ -2.12
CDH1P12830 MRPS17P9-201ENST00000511924 393 ntBASIC1.81□□□□□ -2.12
CDH1P12830 AC136628.3-201ENST00000521868 290 ntBASIC1.81□□□□□ -2.12
CDH1P12830 AC005786.1-201ENST00000588553 154 ntBASIC1.81□□□□□ -2.12
CDH1P12830 BX284668.6-201ENST00000606899 438 ntBASIC1.81□□□□□ -2.12
CDH1P12830 U6.108-201ENST00000637764 58 ntBASIC1.81□□□□□ -2.12
CDH1P12830 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDH1P12830 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDH1P12830 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDH1P12830 Y_RNA.341-201ENST00000365341 102 ntBASIC1.8□□□□□ -2.12
CDH1P12830 Y_RNA.456-201ENST00000384232 111 ntBASIC1.8□□□□□ -2.12
CDH1P12830 RNU6-1289P-201ENST00000384431 106 ntBASIC1.8□□□□□ -2.12
CDH1P12830 RNU11-3P-201ENST00000391111 133 ntBASIC1.8□□□□□ -2.12
CDH1P12830 RNA5SP465-201ENST00000391195 109 ntBASIC1.8□□□□□ -2.12
CDH1P12830 SNORA26.5-201ENST00000391215 123 ntBASIC1.8□□□□□ -2.12
CDH1P12830 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CDH1P12830 EBAG9P1-201ENST00000418955 543 ntBASIC1.8□□□□□ -2.12
CDH1P12830 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.8□□□□□ -2.12
CDH1P12830 CST2P1-201ENST00000425770 87 ntBASIC1.8□□□□□ -2.12
CDH1P12830 RPS20P10-201ENST00000451209 253 ntBASIC1.8□□□□□ -2.12
CDH1P12830 Y_RNA.637-201ENST00000459424 114 ntBASIC1.8□□□□□ -2.12
CDH1P12830 RNU6-63P-201ENST00000516690 95 ntBASIC1.8□□□□□ -2.12
CDH1P12830 RNU6-111P-201ENST00000517179 105 ntBASIC1.8□□□□□ -2.12
CDH1P12830 AP005660.1-201ENST00000522972 293 ntBASIC1.8□□□□□ -2.12
CDH1P12830 MIR4282-201ENST00000583613 67 ntBASIC1.8□□□□□ -2.12
CDH1P12830 AL162424.1-201ENST00000602325 221 ntBASIC1.8□□□□□ -2.12
CDH1P12830 AC004832.4-201ENST00000608952 331 ntBASIC1.8□□□□□ -2.12
CDH1P12830 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CDH1P12830 RNU6-1272P-201ENST00000362776 107 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.76-201ENST00000362931 109 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.82-201ENST00000363000 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.92-201ENST00000363043 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.235-201ENST00000364412 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.306-201ENST00000365015 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.312-201ENST00000365089 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.322-201ENST00000365151 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.79□□□□□ -2.12
CDH1P12830 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
CDH1P12830 RNU6-763P-201ENST00000390865 106 ntBASIC1.79□□□□□ -2.12
CDH1P12830 RNU2-14P-201ENST00000411053 191 ntBASIC1.79□□□□□ -2.12
CDH1P12830 SNORD2.1-201ENST00000458762 69 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.650-201ENST00000459002 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.777-201ENST00000516982 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 RNU6-388P-201ENST00000517012 105 ntBASIC1.79□□□□□ -2.12
CDH1P12830 RNU6-389P-201ENST00000517048 105 ntBASIC1.79□□□□□ -2.12
CDH1P12830 RNU7-172P-201ENST00000517125 64 ntBASIC1.79□□□□□ -2.12
CDH1P12830 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.79□□□□□ -2.12
CDH1P12830 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
CDH1P12830 AC005357.1-201ENST00000588399 301 ntBASIC1.79□□□□□ -2.12
CDH1P12830 AC007229.1-201ENST00000590455 412 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.771-201ENST00000598668 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 AL078604.3-201ENST00000615580 211 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.79□□□□□ -2.12
CDH1P12830 Y_RNA.789-201ENST00000622480 102 ntBASIC1.79□□□□□ -2.12
CDH1P12830 snoU18.1-201ENST00000629629 71 ntBASIC1.79□□□□□ -2.12
CDH1P12830 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CDH1P12830 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
CDH1P12830 Y_RNA.122-201ENST00000363331 96 ntBASIC1.78□□□□□ -2.12
CDH1P12830 RNU6-1048P-201ENST00000364054 107 ntBASIC1.78□□□□□ -2.12
CDH1P12830 Y_RNA.269-201ENST00000364685 89 ntBASIC1.78□□□□□ -2.12
CDH1P12830 RNU6-338P-201ENST00000383888 105 ntBASIC1.78□□□□□ -2.12
CDH1P12830 SNORA72.4-201ENST00000384174 132 ntBASIC1.78□□□□□ -2.12
CDH1P12830 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.78□□□□□ -2.12
CDH1P12830 RNU6-1186P-201ENST00000410429 97 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms