Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MTCO3P10-201ENST00000455912 772 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU7-169P-201ENST00000459456 61 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RPS26P55-201ENST00000471178 356 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.71□□□□□ -2.3
COL11A1P12107 AC097462.1-201ENST00000514125 324 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6-120P-201ENST00000516077 103 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6-1012P-201ENST00000516606 109 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU1-142P-201ENST00000516682 145 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6-856P-201ENST00000516959 98 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC023442.1-201ENST00000531247 422 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MIR548S-201ENST00000581352 82 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC069114.2-201ENST00000604699 304 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC005562.2-201ENST00000618264 111 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC099654.5-201ENST00000636479 350 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC100821.1-201ENST00000523153 2479 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 Y_RNA.70-201ENST00000362886 110 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6-112P-201ENST00000363599 104 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU1-96P-201ENST00000364163 162 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 Y_RNA.280-201ENST00000364765 112 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MIR597-201ENST00000384968 97 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNY4P36-201ENST00000391116 96 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MTCYBP4-201ENST00000401524 249 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MIR1253-201ENST00000408273 105 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6-1186P-201ENST00000410429 97 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MTND4P28-201ENST00000426217 387 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC099799.1-201ENST00000439809 192 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.71□□□□□ -2.3
COL11A1P12107 snoU13.9-201ENST00000458927 103 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 snoU13.27-201ENST00000459278 104 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU7-87P-201ENST00000459343 62 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC134698.4-201ENST00000523451 826 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.71□□□□□ -2.3
COL11A1P12107 AP001094.1-201ENST00000579805 193 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 MIR3937-201ENST00000580135 106 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 SNORD58B-201ENST00000607313 66 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.71□□□□□ -2.3
COL11A1P12107 AL078596.1-201ENST00000624856 447 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.71□□□□□ -2.3
COL11A1P12107 RNU6-793P-201ENST00000384233 104 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 RNU6-318P-201ENST00000384283 103 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 MIR329-1-201ENST00000385028 80 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 SNORD12B-201ENST00000410433 91 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 MTCO2P27-201ENST00000420740 428 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.7□□□□□ -2.3
COL11A1P12107 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.7□□□□□ -2.3
COL11A1P12107 AL606517.2-201ENST00000442855 241 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.7□□□□□ -2.3
COL11A1P12107 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.7□□□□□ -2.3
COL11A1P12107 RPL26P26-201ENST00000480251 434 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 AC010469.2-201ENST00000496412 480 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 SNORA77B-201ENST00000578179 125 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 MIR5695-201ENST00000579717 85 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 AC006435.5-201ENST00000624486 112 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.7□□□□□ -2.3
COL11A1P12107 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL11A1P12107 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.7□□□□□ -2.3
COL11A1P12107 SNORD33-201ENST00000362761 85 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 RNU6-490P-201ENST00000362985 107 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 RNU6-324P-201ENST00000363957 106 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 RNU6-1040P-201ENST00000383974 107 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 Y_RNA.415-201ENST00000384012 112 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 MIR559-201ENST00000385188 96 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 MIR548B-201ENST00000385247 97 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 MIR190B-201ENST00000401119 79 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.69□□□□□ -2.3
COL11A1P12107 AC099513.1-201ENST00000490423 301 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 UBL5P1-201ENST00000507979 193 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 RNU6-1278P-201ENST00000516130 107 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 RNVU1-2-201ENST00000516326 135 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 AC024995.1-201ENST00000523014 93 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 FRG2DP-202ENST00000566967 323 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 MIR4438-201ENST00000585271 93 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 AL606534.2-204ENST00000635008 178 ntBASIC0.69□□□□□ -2.3
COL11A1P12107 RNU6-874P-201ENST00000362390 105 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 Y_RNA.58-201ENST00000362807 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNU6-23P-201ENST00000363283 107 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 Y_RNA.154-201ENST00000363624 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 SNORA63D-201ENST00000364359 132 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNY3P1-201ENST00000365085 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 Y_RNA.315-201ENST00000365117 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNY3-201ENST00000365484 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 MT-TD-201ENST00000387419 68 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.68□□□□□ -2.3
COL11A1P12107 MTND1P14-201ENST00000427400 950 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RAB28P5-201ENST00000427490 651 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.68□□□□□ -2.3
COL11A1P12107 HMGN2P34-201ENST00000437647 269 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AL137792.2-201ENST00000443484 235 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AC073910.1-201ENST00000445047 438 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 HMGN1P13-201ENST00000505795 138 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.68□□□□□ -2.3
COL11A1P12107 RNU6-1041P-201ENST00000516254 102 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 SNORA40.14-201ENST00000516543 86 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 RNU6-1213P-201ENST00000517075 94 ntBASIC0.68□□□□□ -2.3
COL11A1P12107 AC025647.1-201ENST00000517879 253 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms