Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SNORA9.3-201ENST00000516383 129 ntBASIC2.16□□□□□ -2.06
PF4V1P10720 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
PF4V1P10720 Y_RNA.777-201ENST00000516982 102 ntBASIC2.16□□□□□ -2.06
PF4V1P10720 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.16□□□□□ -2.06
PF4V1P10720 Y_RNA.771-201ENST00000598668 102 ntBASIC2.16□□□□□ -2.06
PF4V1P10720 BX284668.6-201ENST00000606899 438 ntBASIC2.16□□□□□ -2.06
PF4V1P10720 Y_RNA.789-201ENST00000622480 102 ntBASIC2.16□□□□□ -2.06
PF4V1P10720 RNU6-414P-201ENST00000363705 104 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 Y_RNA.265-201ENST00000364677 108 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 RNU6-1031P-201ENST00000384773 107 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 SNORA36B-201ENST00000410438 131 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 Y_RNA.618-201ENST00000410949 107 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 snoU18.1-201ENST00000629629 71 ntBASIC2.15□□□□□ -2.07
PF4V1P10720 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
PF4V1P10720 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PF4V1P10720 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PF4V1P10720 AC134026.1-201ENST00000623249 2239 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.14□□□□□ -2.07
PF4V1P10720 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PF4V1P10720 MIR9-1-201ENST00000385198 89 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PF4V1P10720 RNU2-52P-201ENST00000410680 190 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
PF4V1P10720 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.14□□□□□ -2.07
PF4V1P10720 STAG3L5P-204ENST00000443759 179 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 AC096725.1-201ENST00000514266 313 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.14□□□□□ -2.07
PF4V1P10720 MIR5692C2-201ENST00000577959 77 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 AC005357.1-201ENST00000588399 301 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 AL008718.3-201ENST00000610217 321 ntBASIC2.14□□□□□ -2.07
PF4V1P10720 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.14□□□□□ -2.07
PF4V1P10720 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
PF4V1P10720 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PF4V1P10720 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PF4V1P10720 Y_RNA.54-201ENST00000362766 105 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 Y_RNA.117-201ENST00000363294 101 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 RNU6-1205P-201ENST00000363625 106 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 RNU6-1080P-201ENST00000383982 107 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 Y_RNA.590-201ENST00000410140 107 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 RNA5SP21-201ENST00000410917 96 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.13□□□□□ -2.07
PF4V1P10720 RPS29P6-201ENST00000438196 145 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 SNORD2.1-201ENST00000458762 69 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 RNU6-437P-201ENST00000459408 95 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.13□□□□□ -2.07
PF4V1P10720 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 MIR3670-2-201ENST00000582974 65 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 MIR3670-1-201ENST00000584160 65 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 MIR3670-3-201ENST00000584855 65 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 AC103810.8-201ENST00000607347 118 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 MIR3670-4-201ENST00000612260 65 ntBASIC2.13□□□□□ -2.07
PF4V1P10720 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PF4V1P10720 RNU4-82P-201ENST00000362443 140 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 Y_RNA.20-201ENST00000362479 113 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RNU6-674P-201ENST00000363831 107 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RNU1-112P-201ENST00000364401 164 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 Y_RNA.307-201ENST00000365022 117 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RNA5SP126-201ENST00000365092 109 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RNU6-211P-201ENST00000384047 107 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.12□□□□□ -2.07
PF4V1P10720 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 JTBP1-201ENST00000441314 247 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RN7SL429P-201ENST00000479090 223 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RN7SL489P-201ENST00000486185 223 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RN7SL327P-201ENST00000488659 223 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.12□□□□□ -2.07
PF4V1P10720 RNU6-1023P-201ENST00000516137 106 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 Y_RNA.679-201ENST00000516416 91 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 SNORA44.1-201ENST00000517031 108 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 MIR4282-201ENST00000583613 67 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 RN7SL853P-201ENST00000617250 223 ntBASIC2.12□□□□□ -2.07
PF4V1P10720 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PF4V1P10720 Y_RNA.203-201ENST00000364106 102 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 Y_RNA.277-201ENST00000364754 102 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 Y_RNA.447-201ENST00000384184 113 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 OR9P1P-201ENST00000496431 281 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.11□□□□□ -2.07
PF4V1P10720 MIR2681-201ENST00000581814 105 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 MIR4635-201ENST00000583759 79 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 AC021506.2-201ENST00000612354 169 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 MIR8074-201ENST00000615081 81 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 AC073349.3-201ENST00000617616 186 ntBASIC2.11□□□□□ -2.07
PF4V1P10720 AC080100.1-201ENST00000624239 5356 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PF4V1P10720 Y_RNA.122-201ENST00000363331 96 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 RNU4-41P-201ENST00000364426 143 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 Y_RNA.253-201ENST00000364562 112 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 RNU6-439P-201ENST00000384188 106 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PF4V1P10720 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.1□□□□□ -2.07
PF4V1P10720 RPL30P13-201ENST00000418873 348 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 AC108938.1-201ENST00000451204 136 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 AC099513.1-201ENST00000490423 301 ntBASIC2.1□□□□□ -2.07
PF4V1P10720 HMGN1P7-201ENST00000491722 313 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms