Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC027279.3-201ENST00000625055 122 ntBASIC1.2□□□□□ -2.22
APOA4P06727 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
APOA4P06727 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
APOA4P06727 Y_RNA.605-201ENST00000410577 105 ntBASIC1.19□□□□□ -2.22
APOA4P06727 AC138393.2-201ENST00000414742 246 ntBASIC1.19□□□□□ -2.22
APOA4P06727 MRPS18CP6-201ENST00000423587 223 ntBASIC1.19□□□□□ -2.22
APOA4P06727 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.19□□□□□ -2.22
APOA4P06727 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.19□□□□□ -2.22
APOA4P06727 AL163540.1-201ENST00000485382 386 ntBASIC1.19□□□□□ -2.22
APOA4P06727 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.19□□□□□ -2.22
APOA4P06727 RNU6-911P-201ENST00000516523 104 ntBASIC1.19□□□□□ -2.22
APOA4P06727 RNU6-1012P-201ENST00000516606 109 ntBASIC1.19□□□□□ -2.22
APOA4P06727 AC005176.2-201ENST00000596933 147 ntBASIC1.19□□□□□ -2.22
APOA4P06727 HSPE1P19-201ENST00000603327 295 ntBASIC1.19□□□□□ -2.22
APOA4P06727 AL355073.2-201ENST00000612106 557 ntBASIC1.19□□□□□ -2.22
APOA4P06727 RNU6-1105P-201ENST00000384774 107 ntBASIC1.18□□□□□ -2.22
APOA4P06727 MIR526A1-201ENST00000384897 85 ntBASIC1.18□□□□□ -2.22
APOA4P06727 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
APOA4P06727 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
APOA4P06727 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.18□□□□□ -2.22
APOA4P06727 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.18□□□□□ -2.22
APOA4P06727 PRDX4P1-201ENST00000507189 574 ntBASIC1.18□□□□□ -2.22
APOA4P06727 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
APOA4P06727 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
APOA4P06727 U2.1-201ENST00000618978 145 ntBASIC1.18□□□□□ -2.22
APOA4P06727 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.18□□□□□ -2.22
APOA4P06727 AC099654.14-201ENST00000638599 341 ntBASIC1.18□□□□□ -2.22
APOA4P06727 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.18□□□□□ -2.22
APOA4P06727 RNY3P11-201ENST00000364153 102 ntBASIC1.17□□□□□ -2.22
APOA4P06727 RNU6-1080P-201ENST00000383982 107 ntBASIC1.17□□□□□ -2.22
APOA4P06727 RNU6-163P-201ENST00000384396 106 ntBASIC1.17□□□□□ -2.22
APOA4P06727 RNU6-1297P-201ENST00000384415 104 ntBASIC1.17□□□□□ -2.22
APOA4P06727 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
APOA4P06727 RNU2-61P-201ENST00000411069 191 ntBASIC1.17□□□□□ -2.22
APOA4P06727 AC099799.1-201ENST00000439809 192 ntBASIC1.17□□□□□ -2.22
APOA4P06727 LINC01399-202ENST00000458450 244 ntBASIC1.17□□□□□ -2.22
APOA4P06727 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
APOA4P06727 snoU13.31-201ENST00000607291 104 ntBASIC1.17□□□□□ -2.22
APOA4P06727 AL391516.1-201ENST00000554380 2449 ntBASIC1.17□□□□□ -2.22
APOA4P06727 RNU6-490P-201ENST00000362985 107 ntBASIC1.16□□□□□ -2.22
APOA4P06727 SNORD68-201ENST00000363214 84 ntBASIC1.16□□□□□ -2.22
APOA4P06727 Y_RNA.314-201ENST00000365114 102 ntBASIC1.16□□□□□ -2.22
APOA4P06727 Y_RNA.363-201ENST00000365529 113 ntBASIC1.16□□□□□ -2.22
APOA4P06727 RNU6-20P-201ENST00000384106 107 ntBASIC1.16□□□□□ -2.22
APOA4P06727 SNORD116-13-201ENST00000384408 92 ntBASIC1.16□□□□□ -2.22
APOA4P06727 Y_RNA.621-201ENST00000411065 96 ntBASIC1.16□□□□□ -2.22
APOA4P06727 RNU6-1199P-201ENST00000411249 104 ntBASIC1.16□□□□□ -2.22
APOA4P06727 AC063976.4-201ENST00000421971 163 ntBASIC1.16□□□□□ -2.22
APOA4P06727 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
APOA4P06727 RPEP5-201ENST00000441137 268 ntBASIC1.16□□□□□ -2.22
APOA4P06727 RBMX2P4-201ENST00000441256 376 ntBASIC1.16□□□□□ -2.22
APOA4P06727 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.16□□□□□ -2.22
APOA4P06727 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
APOA4P06727 AC004832.4-201ENST00000608952 331 ntBASIC1.16□□□□□ -2.22
APOA4P06727 AC122108.2-201ENST00000611946 526 ntBASIC1.16□□□□□ -2.22
APOA4P06727 AL591926.4-201ENST00000616895 298 ntBASIC1.16□□□□□ -2.22
APOA4P06727 AC138305.3-201ENST00000624988 240 ntBASIC1.16□□□□□ -2.22
APOA4P06727 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
APOA4P06727 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
APOA4P06727 RNU6-626P-201ENST00000363354 107 ntBASIC1.15□□□□□ -2.23
APOA4P06727 U8.5-201ENST00000364528 136 ntBASIC1.15□□□□□ -2.23
APOA4P06727 Y_RNA.446-201ENST00000384178 104 ntBASIC1.15□□□□□ -2.23
APOA4P06727 MIR559-201ENST00000385188 96 ntBASIC1.15□□□□□ -2.23
APOA4P06727 MIR628-201ENST00000385229 95 ntBASIC1.15□□□□□ -2.23
APOA4P06727 PIGPP3-201ENST00000425307 415 ntBASIC1.15□□□□□ -2.23
APOA4P06727 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.15□□□□□ -2.23
APOA4P06727 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
APOA4P06727 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.15□□□□□ -2.23
APOA4P06727 MIR4659A-201ENST00000580269 81 ntBASIC1.15□□□□□ -2.23
APOA4P06727 MIR4762-201ENST00000585261 75 ntBASIC1.15□□□□□ -2.23
APOA4P06727 AC012676.2-201ENST00000619258 186 ntBASIC1.15□□□□□ -2.23
APOA4P06727 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.14□□□□□ -2.23
APOA4P06727 Y_RNA.336-201ENST00000365307 109 ntBASIC1.14□□□□□ -2.23
APOA4P06727 Y_RNA.387-201ENST00000383918 102 ntBASIC1.14□□□□□ -2.23
APOA4P06727 SNORA80D-201ENST00000384488 135 ntBASIC1.14□□□□□ -2.23
APOA4P06727 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
APOA4P06727 AC092473.1-201ENST00000441098 221 ntBASIC1.14□□□□□ -2.23
APOA4P06727 AC114811.1-201ENST00000507207 168 ntBASIC1.14□□□□□ -2.23
APOA4P06727 RNU6-155P-201ENST00000516347 100 ntBASIC1.14□□□□□ -2.23
APOA4P06727 SNORD111.1-201ENST00000516421 86 ntBASIC1.14□□□□□ -2.23
APOA4P06727 AC022616.4-201ENST00000522985 181 ntBASIC1.14□□□□□ -2.23
APOA4P06727 AC011604.1-201ENST00000545978 196 ntBASIC1.14□□□□□ -2.23
APOA4P06727 AL050343.2-201ENST00000607338 280 ntBASIC1.14□□□□□ -2.23
APOA4P06727 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.14□□□□□ -2.23
APOA4P06727 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
APOA4P06727 Y_RNA.27-201ENST00000362540 103 ntBASIC1.13□□□□□ -2.23
APOA4P06727 Y_RNA.142-201ENST00000363491 102 ntBASIC1.13□□□□□ -2.23
APOA4P06727 RNU6-324P-201ENST00000363957 106 ntBASIC1.13□□□□□ -2.23
APOA4P06727 Y_RNA.230-201ENST00000364348 109 ntBASIC1.13□□□□□ -2.23
APOA4P06727 Y_RNA.259-201ENST00000364619 101 ntBASIC1.13□□□□□ -2.23
APOA4P06727 MIR452-201ENST00000385020 85 ntBASIC1.13□□□□□ -2.23
APOA4P06727 AC093019.1-201ENST00000443135 252 ntBASIC1.13□□□□□ -2.23
APOA4P06727 CHEK2P4-201ENST00000450340 246 ntBASIC1.13□□□□□ -2.23
APOA4P06727 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
APOA4P06727 RNU6-436P-201ENST00000516171 114 ntBASIC1.13□□□□□ -2.23
APOA4P06727 RNU6-277P-201ENST00000516272 106 ntBASIC1.13□□□□□ -2.23
APOA4P06727 AL096861.1-201ENST00000610899 123 ntBASIC1.13□□□□□ -2.23
APOA4P06727 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
APOA4P06727 AC011476.5-201ENST00000615594 130 ntBASIC1.13□□□□□ -2.23
APOA4P06727 AL008636.1-201ENST00000625038 1018 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 534.9 ms