Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 AC010409.1-201ENST00000487382 476 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 SNORD116-25-201ENST00000516517 92 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 SNORA31.26-201ENST00000517250 137 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 AC025647.1-201ENST00000517879 253 ntBASIC2.54□□□□□ -2
HLA-DOAP06340 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DOAP06340 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DOAP06340 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DOAP06340 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DOAP06340 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DOAP06340 Y_RNA.121-201ENST00000363309 113 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 RNU4-84P-201ENST00000364200 139 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 RNU6-275P-201ENST00000364910 107 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 Y_RNA.580-201ENST00000391004 95 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 RNU6-131P-201ENST00000391144 107 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 AL023284.1-201ENST00000403956 276 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 TMSB4XP3-201ENST00000445144 114 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 AL137159.1-201ENST00000452808 512 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOAP06340 AC018868.1-201ENST00000491307 315 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DOAP06340 MIR4744-201ENST00000581563 82 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 Y_RNA.802-201ENST00000614892 130 ntBASIC2.53□□□□□ -2
HLA-DOAP06340 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HLA-DOAP06340 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.53□□□□□ -2.01
HLA-DOAP06340 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DOAP06340 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DOAP06340 Y_RNA.23-201ENST00000362496 106 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 SNORA25.6-201ENST00000364121 118 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 Y_RNA.229-201ENST00000364347 113 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 RNU6-312P-201ENST00000364629 107 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 MIR627-201ENST00000384979 97 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 MIR613-201ENST00000385248 95 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 AC003685.2-201ENST00000422795 395 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 UBBP3-201ENST00000445497 241 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DOAP06340 RPS26P55-201ENST00000471178 356 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DOAP06340 RNA5SP20-201ENST00000515976 84 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 SNORA70.12-201ENST00000516084 153 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 RNU7-115P-201ENST00000516433 55 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 MIR3658-201ENST00000636291 56 ntBASIC2.52□□□□□ -2.01
HLA-DOAP06340 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
HLA-DOAP06340 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
HLA-DOAP06340 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOAP06340 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HLA-DOAP06340 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOAP06340 MIR340-201ENST00000362125 95 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 RNU6-151P-201ENST00000364158 107 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 RNU6-449P-201ENST00000383914 107 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 SNORA40.19-201ENST00000390846 128 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 MIR1278-201ENST00000408753 81 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 SNORA36B-201ENST00000410438 131 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 RNA5SP511-201ENST00000410487 115 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 RN7SKP164-201ENST00000516138 266 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 SNORA48.11-201ENST00000517015 89 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 RNU6-667P-201ENST00000517186 102 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 AC109810.1-201ENST00000534066 224 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DOAP06340 MIR4524B-201ENST00000581569 115 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 MIR548AY-201ENST00000617669 107 ntBASIC2.51□□□□□ -2.01
HLA-DOAP06340 MIR561-201ENST00000385216 97 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 MTCO1P44-201ENST00000441935 243 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 RNU6-426P-201ENST00000516464 97 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 RN7SKP282-201ENST00000516824 299 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DOAP06340 AC012640.5-201ENST00000623897 319 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DOAP06340 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
HLA-DOAP06340 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HLA-DOAP06340 Y_RNA.357-201ENST00000365487 109 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 CYCSP49-201ENST00000420810 319 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 AC104332.2-201ENST00000429959 156 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 AC114982.1-201ENST00000469402 321 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 AC093259.1-201ENST00000509755 300 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 RNU6-948P-201ENST00000516374 107 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 POLR3GP1-201ENST00000594073 261 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.49□□□□□ -2.01
HLA-DOAP06340 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DOAP06340 MIRLET7G-201ENST00000362280 84 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 RNA5SP432-201ENST00000362480 116 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 Y_RNA.215-201ENST00000364204 112 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 SNORD113-1-201ENST00000365321 69 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DOAP06340 Y_RNA.400-201ENST00000383963 111 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 RNU1-138P-201ENST00000384093 164 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 SNORA20-201ENST00000384662 132 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 MIR616-201ENST00000385293 97 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 MIR526A2-201ENST00000390198 65 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 AL606845.1-201ENST00000404881 255 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms