Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIR215-201ENST00000384858 110 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 MIR515-2-201ENST00000384883 83 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 MIR515-1-201ENST00000384884 83 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 RPL21P1-201ENST00000399532 476 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.39□□□□□ -2.19
MT-ND1P03886 AC005042.3-201ENST00000453230 174 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.39□□□□□ -2.19
MT-ND1P03886 SNORA31.10-201ENST00000516482 106 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 RNU6-1337P-201ENST00000516525 95 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.39□□□□□ -2.19
MT-ND1P03886 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 AL355297.3-201ENST00000604082 446 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
MT-ND1P03886 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
MT-ND1P03886 AC100821.1-201ENST00000523153 2479 ntBASIC1.39□□□□□ -2.19
MT-ND1P03886 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.38□□□□□ -2.19
MT-ND1P03886 SNORD114-7-201ENST00000362520 77 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 SNORD33-201ENST00000362761 85 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 Y_RNA.64-201ENST00000362845 102 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 SNORD113-8-201ENST00000363497 74 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 RNU6-770P-201ENST00000363929 105 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 RNU6-324P-201ENST00000363957 106 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 Y_RNA.222-201ENST00000364264 102 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 SNORD116-13-201ENST00000384408 92 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 RNU6-1160P-201ENST00000384546 104 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 RNU6-136P-201ENST00000384663 107 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 MIR606-201ENST00000384851 96 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 SNORA12.1-201ENST00000390873 148 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.38□□□□□ -2.19
MT-ND1P03886 RPL21P38-201ENST00000418090 167 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 AC010154.1-201ENST00000425857 269 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 HSPE1P25-201ENST00000455484 251 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 LINC01399-202ENST00000458450 244 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 snoU13.15-201ENST00000459407 104 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 Y_RNA.713-201ENST00000517013 96 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 AC091178.2-201ENST00000584401 117 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 DEFB117-201ENST00000602356 141 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 MIR8063-201ENST00000621930 81 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 AC127459.3-201ENST00000624328 466 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 AC095038.3-201ENST00000634439 195 ntBASIC1.38□□□□□ -2.19
MT-ND1P03886 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
MT-ND1P03886 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
MT-ND1P03886 Y_RNA.19-201ENST00000362462 99 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 snoU2_19.2-201ENST00000363024 80 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 SNORA63-201ENST00000363450 132 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 RNA5SP511-201ENST00000410487 115 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 Y_RNA.602-201ENST00000410535 92 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 RPL23AP36-201ENST00000413895 458 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 MTATP8P1-201ENST00000467115 207 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 AC091021.1-201ENST00000468051 388 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.37□□□□□ -2.19
MT-ND1P03886 RNU6-496P-201ENST00000516145 99 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 RNY3P15-201ENST00000516297 97 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 SCARNA15.1-201ENST00000516384 125 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 RNU6-902P-201ENST00000517212 91 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.37□□□□□ -2.19
MT-ND1P03886 MIR3945-201ENST00000581853 98 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 MIR376A1-201ENST00000616574 68 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 AC099654.10-201ENST00000640395 161 ntBASIC1.37□□□□□ -2.19
MT-ND1P03886 AC018630.2-201ENST00000534866 2403 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 SNORD1A-201ENST00000364968 72 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 RNU6-738P-201ENST00000384531 106 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 MIR23A-201ENST00000385245 73 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AL590004.1-201ENST00000405321 300 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AL390729.2-201ENST00000416137 156 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 SUMO1P2-201ENST00000452524 304 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 SEPT14P8-201ENST00000508026 178 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 MRPS35P2-201ENST00000508242 191 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AC007742.2-201ENST00000618226 398 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MT-ND1P03886 AL121890.5-201ENST00000620848 304 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 MIR8054-201ENST00000620877 86 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
MT-ND1P03886 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
MT-ND1P03886 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
MT-ND1P03886 MIR302D-201ENST00000362275 68 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 Y_RNA.276-201ENST00000364732 109 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 Y_RNA.383-201ENST00000383855 97 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 RNU6-203P-201ENST00000384038 104 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 Y_RNA.422-201ENST00000384054 114 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 Y_RNA.512-201ENST00000384518 102 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 RNU6-21P-201ENST00000384710 107 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 CYCSP49-201ENST00000420810 319 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 HSPE1P13-201ENST00000451143 297 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 MTND5P22-201ENST00000458380 195 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 AC079140.2-201ENST00000506193 142 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.35□□□□□ -2.19
MT-ND1P03886 AL442663.2-201ENST00000554385 511 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 AC006504.6-201ENST00000590142 199 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 AL929325.1-201ENST00000603096 117 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 SNORD113-5-201ENST00000607261 78 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms