Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AL512427.1-201ENST00000618593 349 ntBASIC-1.08□□□□□ -2.58
APOC3P02656 AL121895.2-201ENST00000619558 447 ntBASIC-1.08□□□□□ -2.58
APOC3P02656 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 SNORD115-8-201ENST00000363856 82 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 SNORD115-38-201ENST00000365037 82 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 SNORA8.3-201ENST00000384679 139 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 AL354751.2-201ENST00000415471 210 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.09□□□□□ -2.58
APOC3P02656 MTCO1P20-201ENST00000425366 358 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.09□□□□□ -2.58
APOC3P02656 HMGN2P32-201ENST00000444648 269 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 SNORA25.10-201ENST00000515926 124 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 RNA5SP330-201ENST00000517096 96 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 RNU7-181P-201ENST00000517234 74 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 AL157687.1-201ENST00000554853 619 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 MTCO3P23-201ENST00000561363 289 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 AC008507.2-201ENST00000588402 1176 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 U7.6-201ENST00000610841 64 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 U6.114-201ENST00000636407 96 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 AC068137.4-201ENST00000638485 296 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 MTND5P17-201ENST00000418405 1603 ntBASIC-1.09□□□□□ -2.58
APOC3P02656 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.1□□□□□ -2.59
APOC3P02656 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 U8.6-201ENST00000364939 135 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 SNORA75.4-201ENST00000391278 119 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 MIR548L-201ENST00000408303 86 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 RNU6-757P-201ENST00000410334 100 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.1□□□□□ -2.59
APOC3P02656 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-1.1□□□□□ -2.59
APOC3P02656 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC-1.1□□□□□ -2.59
APOC3P02656 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.1□□□□□ -2.59
APOC3P02656 RNU2-13P-201ENST00000515909 113 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.1□□□□□ -2.59
APOC3P02656 AP001180.6-201ENST00000584918 159 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 AC104010.1-201ENST00000616889 150 ntBASIC-1.1□□□□□ -2.59
APOC3P02656 MIR101-1-201ENST00000362265 75 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 MIR30D-201ENST00000362283 70 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 SNORA22B-201ENST00000383876 138 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 RNU4-83P-201ENST00000410863 133 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.11□□□□□ -2.59
APOC3P02656 AL138752.1-201ENST00000452964 351 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.11□□□□□ -2.59
APOC3P02656 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.11□□□□□ -2.59
APOC3P02656 RNU6-751P-201ENST00000516382 101 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.11□□□□□ -2.59
APOC3P02656 AP001330.5-201ENST00000607176 411 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 AC010205.1-201ENST00000616668 449 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 AC105081.1-201ENST00000617727 106 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 AL162376.1-201ENST00000624117 175 ntBASIC-1.11□□□□□ -2.59
APOC3P02656 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.11□□□□□ -2.59
APOC3P02656 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 SNORA1-201ENST00000384107 130 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 SSR1P2-201ENST00000415208 787 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.12□□□□□ -2.59
APOC3P02656 RNU6-107P-201ENST00000516643 102 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 RNA5SP66-201ENST00000517178 101 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 AC069113.1-201ENST00000517763 267 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 MIR4775-201ENST00000581168 75 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 BNIP3P40-201ENST00000596017 556 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 Pinc.1-201ENST00000616452 154 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 AL158209.2-201ENST00000619266 216 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 AC084368.1-201ENST00000620935 65 ntBASIC-1.12□□□□□ -2.59
APOC3P02656 RNU6-726P-201ENST00000364680 107 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 RNU6-169P-201ENST00000365336 107 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.13□□□□□ -2.59
APOC3P02656 RNA5SP127-201ENST00000411051 133 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 AC108059.2-201ENST00000434626 151 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
APOC3P02656 snoU13.2-201ENST00000459201 104 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 AC112204.1-201ENST00000502591 103 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.13□□□□□ -2.59
APOC3P02656 RNU6-475P-201ENST00000516073 104 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 RNU6-830P-201ENST00000516353 107 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.13□□□□□ -2.59
APOC3P02656 AC104984.5-201ENST00000586878 94 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 AC023510.2-201ENST00000622162 746 ntBASIC-1.13□□□□□ -2.59
APOC3P02656 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.13□□□□□ -2.59
APOC3P02656 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-1.13□□□□□ -2.59
APOC3P02656 MTND5P32-201ENST00000560711 1802 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 RNU6-291P-201ENST00000384720 107 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 MIR196A1-201ENST00000388006 70 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.14□□□□□ -2.59
APOC3P02656 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 Y_RNA.670-201ENST00000516255 105 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 MTND4LP18-201ENST00000526864 291 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 AC011712.1-201ENST00000588959 234 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 POLR3GP1-201ENST00000594073 261 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 AC064836.2-201ENST00000609491 462 ntBASIC-1.14□□□□□ -2.59
APOC3P02656 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.15□□□□□ -2.59
APOC3P02656 RNU6-533P-201ENST00000384144 107 ntBASIC-1.15□□□□□ -2.59
APOC3P02656 SNORD116-12-201ENST00000384468 92 ntBASIC-1.15□□□□□ -2.59
APOC3P02656 MTCYBP4-201ENST00000401524 249 ntBASIC-1.15□□□□□ -2.59
APOC3P02656 SNORD93-201ENST00000408813 74 ntBASIC-1.15□□□□□ -2.59
APOC3P02656 AC073464.1-201ENST00000429823 534 ntBASIC-1.15□□□□□ -2.59
APOC3P02656 SCARNA18-201ENST00000459004 134 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms