Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.556-201ENST00000384677 113 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 MIR1289-2-201ENST00000408360 111 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 AL135790.2-201ENST00000437701 267 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 SUMO1P2-201ENST00000452524 304 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.68□□□□□ -2.14
CLPTM1O96005 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 AC097462.1-201ENST00000514125 324 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 RNVU1-2-201ENST00000516326 135 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 RNU6-1337P-201ENST00000516525 95 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 AL137100.2-201ENST00000555786 315 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 MIR5094-201ENST00000578766 85 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 MIR3684-201ENST00000579779 74 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 AC012433.1-201ENST00000588916 398 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 AC006435.5-201ENST00000624486 112 ntBASIC1.68□□□□□ -2.14
CLPTM1O96005 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
CLPTM1O96005 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.67□□□□□ -2.14
CLPTM1O96005 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CLPTM1O96005 RNU1-22P-201ENST00000363334 158 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 Y_RNA.136-201ENST00000363444 102 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.67□□□□□ -2.14
CLPTM1O96005 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 RNU6-855P-201ENST00000410395 104 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 RNA5SP501-201ENST00000410990 112 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 EBAG9P1-201ENST00000418955 543 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.67□□□□□ -2.14
CLPTM1O96005 MTND2P29-201ENST00000438595 412 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 SNORD127-201ENST00000458892 86 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 AC091959.1-201ENST00000495857 238 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 SNORA70.12-201ENST00000516084 153 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 RNU6-191P-201ENST00000516295 94 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 RNU7-128P-201ENST00000517247 62 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.67□□□□□ -2.14
CLPTM1O96005 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 U6.73-201ENST00000619194 103 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 U6.108-201ENST00000637764 58 ntBASIC1.67□□□□□ -2.14
CLPTM1O96005 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
CLPTM1O96005 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLPTM1O96005 RNU6-326P-201ENST00000365480 107 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 RNU6-514P-201ENST00000384208 107 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 Y_RNA.477-201ENST00000384352 108 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 Y_RNA.518-201ENST00000384552 113 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 RNA5SP323-201ENST00000391094 133 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.66□□□□□ -2.14
CLPTM1O96005 CST2P1-201ENST00000425770 87 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 RNU6-1132P-201ENST00000459214 107 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 RNU7-172P-201ENST00000517125 64 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.66□□□□□ -2.14
CLPTM1O96005 AC004817.2-201ENST00000561794 651 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.66□□□□□ -2.14
CLPTM1O96005 AC037487.3-201ENST00000606668 112 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 AC062037.2-201ENST00000610137 73 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 AL359075.3-201ENST00000613288 217 ntBASIC1.66□□□□□ -2.14
CLPTM1O96005 Y_RNA.14-201ENST00000362415 103 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 Y_RNA.307-201ENST00000365022 117 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 RNU6-662P-201ENST00000384253 104 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 RNU6-136P-201ENST00000384663 107 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CLPTM1O96005 AC019129.1-201ENST00000403786 261 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 MTND1P19-201ENST00000511780 315 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 Y_RNA.680-201ENST00000516441 93 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
CLPTM1O96005 AC073413.2-201ENST00000604332 360 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 U2.14-201ENST00000615943 113 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CLPTM1O96005 AC092881.1-201ENST00000638218 2733 ntBASIC1.65□□□□□ -2.15
CLPTM1O96005 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CLPTM1O96005 MIR335-201ENST00000362173 94 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 RNU6-1048P-201ENST00000364054 107 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 Y_RNA.341-201ENST00000365341 102 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 RNU6-117P-201ENST00000365415 107 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 RNU6-376P-201ENST00000384731 106 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 SNORA48.1-201ENST00000390879 135 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.64□□□□□ -2.15
CLPTM1O96005 AC024067.1-201ENST00000426199 223 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 AC245047.4-201ENST00000433189 144 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 RPL39P38-201ENST00000467018 153 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 RNU6-1278P-201ENST00000516130 107 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 AC110588.1-201ENST00000559699 137 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 AL512605.2-201ENST00000592972 256 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 AC004832.4-201ENST00000608952 331 ntBASIC1.64□□□□□ -2.15
CLPTM1O96005 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
CLPTM1O96005 SNORD114-7-201ENST00000362520 77 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 Y_RNA.54-201ENST00000362766 105 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 SNORA40.18-201ENST00000391200 128 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 RNU6-710P-201ENST00000410424 105 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 RNA5SP511-201ENST00000410487 115 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 RNU2-14P-201ENST00000411053 191 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 HSPE1P13-201ENST00000451143 297 ntBASIC1.63□□□□□ -2.15
CLPTM1O96005 RPS20P10-201ENST00000451209 253 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms