Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-1123P-201ENST00000362347 106 ntBASIC1.69□□□□□ -2.14
DDX58O95786 Y_RNA.445-201ENST00000384168 102 ntBASIC1.69□□□□□ -2.14
DDX58O95786 Y_RNA.460-201ENST00000384255 102 ntBASIC1.69□□□□□ -2.14
DDX58O95786 RNU2-54P-201ENST00000410299 190 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AL137792.2-201ENST00000443484 235 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AC233266.1-201ENST00000454518 96 ntBASIC1.69□□□□□ -2.14
DDX58O95786 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.69□□□□□ -2.14
DDX58O95786 SNORA70.12-201ENST00000516084 153 ntBASIC1.69□□□□□ -2.14
DDX58O95786 SNORA40.14-201ENST00000516543 86 ntBASIC1.69□□□□□ -2.14
DDX58O95786 RNU2-12P-201ENST00000517216 168 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AL162424.1-201ENST00000602325 221 ntBASIC1.69□□□□□ -2.14
DDX58O95786 SNORD58B-201ENST00000607313 66 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AC242852.1-201ENST00000612151 96 ntBASIC1.69□□□□□ -2.14
DDX58O95786 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AC244015.1-201ENST00000622301 99 ntBASIC1.69□□□□□ -2.14
DDX58O95786 uc_338.22-201ENST00000622722 187 ntBASIC1.69□□□□□ -2.14
DDX58O95786 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
DDX58O95786 Y_RNA.265-201ENST00000364677 108 ntBASIC1.68□□□□□ -2.14
DDX58O95786 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.68□□□□□ -2.14
DDX58O95786 Y_RNA.424-201ENST00000384063 103 ntBASIC1.68□□□□□ -2.14
DDX58O95786 Y_RNA.446-201ENST00000384178 104 ntBASIC1.68□□□□□ -2.14
DDX58O95786 Y_RNA.526-201ENST00000384572 110 ntBASIC1.68□□□□□ -2.14
DDX58O95786 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
DDX58O95786 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
DDX58O95786 AL135790.2-201ENST00000437701 267 ntBASIC1.68□□□□□ -2.14
DDX58O95786 AC091021.1-201ENST00000468051 388 ntBASIC1.68□□□□□ -2.14
DDX58O95786 RNU6-63P-201ENST00000516690 95 ntBASIC1.68□□□□□ -2.14
DDX58O95786 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
DDX58O95786 RNU6-902P-201ENST00000517212 91 ntBASIC1.68□□□□□ -2.14
DDX58O95786 SUMO2P16-201ENST00000519475 264 ntBASIC1.68□□□□□ -2.14
DDX58O95786 AC005828.6-201ENST00000606610 232 ntBASIC1.68□□□□□ -2.14
DDX58O95786 SNORA28-201ENST00000606769 126 ntBASIC1.68□□□□□ -2.14
DDX58O95786 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
DDX58O95786 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
DDX58O95786 MTND4P29-201ENST00000503122 1372 ntBASIC1.68□□□□□ -2.14
DDX58O95786 AC091812.1-201ENST00000432235 1948 ntBASIC1.68□□□□□ -2.14
DDX58O95786 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
DDX58O95786 Y_RNA.61-201ENST00000362835 102 ntBASIC1.67□□□□□ -2.14
DDX58O95786 Y_RNA.112-201ENST00000363250 102 ntBASIC1.67□□□□□ -2.14
DDX58O95786 SNORD115-30-201ENST00000364117 82 ntBASIC1.67□□□□□ -2.14
DDX58O95786 SNORD14.1-201ENST00000365609 90 ntBASIC1.67□□□□□ -2.14
DDX58O95786 RNU6-505P-201ENST00000384427 107 ntBASIC1.67□□□□□ -2.14
DDX58O95786 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
DDX58O95786 MIR562-201ENST00000384894 95 ntBASIC1.67□□□□□ -2.14
DDX58O95786 AL031003.1-201ENST00000404229 172 ntBASIC1.67□□□□□ -2.14
DDX58O95786 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.67□□□□□ -2.14
DDX58O95786 SNX2P2-201ENST00000424553 323 ntBASIC1.67□□□□□ -2.14
DDX58O95786 STAG3L5P-204ENST00000443759 179 ntBASIC1.67□□□□□ -2.14
DDX58O95786 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.67□□□□□ -2.14
DDX58O95786 AC015688.6-201ENST00000577737 104 ntBASIC1.67□□□□□ -2.14
DDX58O95786 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
DDX58O95786 MIR3660-201ENST00000584845 100 ntBASIC1.67□□□□□ -2.14
DDX58O95786 AL390123.1-201ENST00000603216 237 ntBASIC1.67□□□□□ -2.14
DDX58O95786 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
DDX58O95786 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.67□□□□□ -2.14
DDX58O95786 AL160413.1-201ENST00000622780 310 ntBASIC1.67□□□□□ -2.14
DDX58O95786 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
DDX58O95786 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.66□□□□□ -2.14
DDX58O95786 Y_RNA.230-201ENST00000364348 109 ntBASIC1.66□□□□□ -2.14
DDX58O95786 RNU6-1175P-201ENST00000365200 107 ntBASIC1.66□□□□□ -2.14
DDX58O95786 SNORA40.6-201ENST00000391153 128 ntBASIC1.66□□□□□ -2.14
DDX58O95786 PGBD4P5-201ENST00000445958 426 ntBASIC1.66□□□□□ -2.14
DDX58O95786 AC004223.1-201ENST00000479840 271 ntBASIC1.66□□□□□ -2.14
DDX58O95786 RNA5SP61-201ENST00000516453 100 ntBASIC1.66□□□□□ -2.14
DDX58O95786 RNU6-1291P-201ENST00000516591 104 ntBASIC1.66□□□□□ -2.14
DDX58O95786 AC040926.1-201ENST00000530195 238 ntBASIC1.66□□□□□ -2.14
DDX58O95786 AL121655.1-201ENST00000605811 308 ntBASIC1.66□□□□□ -2.14
DDX58O95786 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
DDX58O95786 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
DDX58O95786 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
DDX58O95786 SNORA25.9-201ENST00000365087 128 ntBASIC1.65□□□□□ -2.15
DDX58O95786 Y_RNA.439-201ENST00000384119 94 ntBASIC1.65□□□□□ -2.15
DDX58O95786 Y_RNA.458-201ENST00000384240 102 ntBASIC1.65□□□□□ -2.15
DDX58O95786 MIR499A-201ENST00000384903 122 ntBASIC1.65□□□□□ -2.15
DDX58O95786 AC027119.1-201ENST00000440877 241 ntBASIC1.65□□□□□ -2.15
DDX58O95786 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.65□□□□□ -2.15
DDX58O95786 U8.20-201ENST00000459445 131 ntBASIC1.65□□□□□ -2.15
DDX58O95786 RN7SKP295-201ENST00000517264 153 ntBASIC1.65□□□□□ -2.15
DDX58O95786 AC005592.1-201ENST00000566527 1640 ntBASIC1.65□□□□□ -2.15
DDX58O95786 Y_RNA.31-201ENST00000362574 102 ntBASIC1.64□□□□□ -2.15
DDX58O95786 RNU4-50P-201ENST00000364361 141 ntBASIC1.64□□□□□ -2.15
DDX58O95786 Y_RNA.395-201ENST00000383945 109 ntBASIC1.64□□□□□ -2.15
DDX58O95786 Y_RNA.471-201ENST00000384312 102 ntBASIC1.64□□□□□ -2.15
DDX58O95786 MIR758-201ENST00000390227 88 ntBASIC1.64□□□□□ -2.15
DDX58O95786 RNU5A-5P-201ENST00000411054 116 ntBASIC1.64□□□□□ -2.15
DDX58O95786 Y_RNA.621-201ENST00000411065 96 ntBASIC1.64□□□□□ -2.15
DDX58O95786 MCFD2P1-201ENST00000417812 300 ntBASIC1.64□□□□□ -2.15
DDX58O95786 RPEP5-201ENST00000441137 268 ntBASIC1.64□□□□□ -2.15
DDX58O95786 MTND4P19-201ENST00000446659 478 ntBASIC1.64□□□□□ -2.15
DDX58O95786 SNORA25.10-201ENST00000515926 124 ntBASIC1.64□□□□□ -2.15
DDX58O95786 RNU6-1337P-201ENST00000516525 95 ntBASIC1.64□□□□□ -2.15
DDX58O95786 RNU7-110P-201ENST00000516891 62 ntBASIC1.64□□□□□ -2.15
DDX58O95786 RNU6-1096P-201ENST00000517089 102 ntBASIC1.64□□□□□ -2.15
DDX58O95786 AC022441.3-201ENST00000605737 136 ntBASIC1.64□□□□□ -2.15
DDX58O95786 AC011373.1-201ENST00000607270 237 ntBASIC1.64□□□□□ -2.15
DDX58O95786 AL365434.2-201ENST00000607979 234 ntBASIC1.64□□□□□ -2.15
DDX58O95786 MIR6078-201ENST00000611069 100 ntBASIC1.64□□□□□ -2.15
DDX58O95786 AC010205.1-201ENST00000616668 449 ntBASIC1.64□□□□□ -2.15
DDX58O95786 SNORD3E-202ENST00000627253 216 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms