Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-323P-201ENST00000521915 107 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 AC104576.1-201ENST00000524225 88 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.41□□□□□ -2.47
ABCA1O95477 MIR548AD-201ENST00000584780 82 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.47
ABCA1O95477 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 MIR1-2-201ENST00000384961 85 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 SNORA26-201ENST00000391286 122 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 RNA5SP494-201ENST00000410653 129 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 RNU6-284P-201ENST00000411105 106 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 MTND1P26-201ENST00000440488 538 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 SPINT5P-201ENST00000448174 155 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 AC018710.1-201ENST00000506509 158 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 MIR2115-201ENST00000516657 100 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 RNU2-56P-201ENST00000516826 190 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 MTND4P33-201ENST00000556706 766 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 PIGPP4-201ENST00000584447 307 ntBASIC-0.41□□□□□ -2.48
ABCA1O95477 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.41□□□□□ -2.48
ABCA1O95477 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 MTCO2P21-201ENST00000419780 677 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 MTND4P32-201ENST00000437189 1237 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 MTND3P1-201ENST00000441336 220 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 AC087499.4-201ENST00000448505 178 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-0.42□□□□□ -2.48
ABCA1O95477 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.42□□□□□ -2.48
ABCA1O95477 SNORD87-201ENST00000364849 89 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 RNU6-934P-201ENST00000365154 107 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 RNU6-517P-201ENST00000384362 110 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 AC100830.2-201ENST00000581636 240 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 AC063944.3-201ENST00000609969 533 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 AC006386.1-201ENST00000619436 415 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 RNU6-407P-201ENST00000365280 104 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 SNORA75.1-201ENST00000391130 148 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 BTF3P11-201ENST00000426582 477 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.43□□□□□ -2.48
ABCA1O95477 SUMO1P2-201ENST00000452524 304 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.43□□□□□ -2.48
ABCA1O95477 snoU13.6-201ENST00000458785 104 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 AC107297.1-201ENST00000459991 176 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 RNU6-135P-201ENST00000516769 101 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 MIR3684-201ENST00000579779 74 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 MIR4320-201ENST00000636981 65 ntBASIC-0.43□□□□□ -2.48
ABCA1O95477 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 PCNPP3-201ENST00000393579 471 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 AL049545.1-201ENST00000401856 572 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.44□□□□□ -2.48
ABCA1O95477 RNU2-69P-201ENST00000516061 100 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.44□□□□□ -2.48
ABCA1O95477 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.44□□□□□ -2.48
ABCA1O95477 RNU6-906P-201ENST00000384700 70 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 RNU6-127P-201ENST00000390897 107 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 AC098592.1-201ENST00000419352 333 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 AL358934.1-201ENST00000432346 324 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 RPL23AP75-201ENST00000491601 451 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 RNU6-276P-201ENST00000516114 96 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 RNA5SP461-201ENST00000516451 104 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 AC133485.4-201ENST00000561835 220 ntBASIC-0.44□□□□□ -2.48
ABCA1O95477 RNU6-809P-201ENST00000384461 107 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU6-903P-201ENST00000391270 109 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU2-29P-201ENST00000410423 189 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU7-129P-201ENST00000516128 62 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 AL157687.1-201ENST00000554853 619 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 UBL5P4-201ENST00000562584 236 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 MIR4771-2-201ENST00000577758 74 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 MIR4771-1-201ENST00000582617 74 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 SNORD92-201ENST00000585078 85 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 AC087685.1-201ENST00000587507 141 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 AC006566.1-201ENST00000608943 513 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 MIR6738-201ENST00000619620 64 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 AC126544.2-201ENST00000625174 749 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU4-84P-201ENST00000364200 139 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 SNORA69-201ENST00000383895 132 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU2-54P-201ENST00000410299 190 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 AC090844.1-201ENST00000422019 156 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 MTND4P19-201ENST00000446659 478 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU7-185P-201ENST00000459215 60 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.45□□□□□ -2.48
ABCA1O95477 RNU1-117P-201ENST00000517041 158 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 MIR5706-201ENST00000579841 80 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 MIR548AR-201ENST00000582191 57 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 U2.17-201ENST00000611454 95 ntBASIC-0.45□□□□□ -2.48
ABCA1O95477 RNA5SP192-201ENST00000364404 120 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 RNU6-117P-201ENST00000365415 107 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 MIR18B-201ENST00000454574 71 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 RNU6-475P-201ENST00000516073 104 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 RNU7-156P-201ENST00000517214 74 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 MTND1P8-201ENST00000571424 950 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 MIR4324-201ENST00000584846 72 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 AC064836.2-201ENST00000609491 462 ntBASIC-0.46□□□□□ -2.48
ABCA1O95477 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms