Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
RAPGEF3O95398 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RAPGEF3O95398 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RAPGEF3O95398 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RAPGEF3O95398 RNA5SP393-201ENST00000363423 117 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 RNU1-148P-201ENST00000384472 162 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 MIR29C-201ENST00000385231 88 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 AL353689.1-201ENST00000438895 199 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 SNORA31.15-201ENST00000516771 132 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 MIR4446-201ENST00000578505 67 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 MIR4282-201ENST00000583613 67 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 AC009779.6-201ENST00000603972 165 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.85□□□□□ -1.95
RAPGEF3O95398 CENPCP1-201ENST00000533085 2578 ntBASIC2.85□□□□□ -1.95
RAPGEF3O95398 Y_RNA.65-201ENST00000362846 100 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 Y_RNA.368-201ENST00000365547 113 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 RNU1-52P-201ENST00000384190 164 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 Y_RNA.456-201ENST00000384232 111 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 RNU6-1289P-201ENST00000384431 106 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 MIR1253-201ENST00000408273 105 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 Y_RNA.590-201ENST00000410140 107 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.84□□□□□ -1.95
RAPGEF3O95398 RPS26P55-201ENST00000471178 356 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 RNA5SP137-201ENST00000516833 135 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 AC136628.3-201ENST00000521868 290 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.84□□□□□ -1.95
RAPGEF3O95398 MIR4643-201ENST00000577473 78 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 AL078604.3-201ENST00000615580 211 ntBASIC2.84□□□□□ -1.95
RAPGEF3O95398 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RAPGEF3O95398 AC060773.1-201ENST00000421698 310 ntBASIC2.83□□□□□ -1.96
RAPGEF3O95398 RNA5SP20-201ENST00000515976 84 ntBASIC2.83□□□□□ -1.96
RAPGEF3O95398 Y_RNA.679-201ENST00000516416 91 ntBASIC2.83□□□□□ -1.96
RAPGEF3O95398 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.83□□□□□ -1.96
RAPGEF3O95398 AL353149.1-201ENST00000610667 244 ntBASIC2.83□□□□□ -1.96
RAPGEF3O95398 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.83□□□□□ -1.96
RAPGEF3O95398 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.83□□□□□ -1.96
RAPGEF3O95398 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
RAPGEF3O95398 Z82195.2-201ENST00000612348 18351 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RAPGEF3O95398 RNU6-1272P-201ENST00000362776 107 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 RNU6-662P-201ENST00000384253 104 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 SNORA40.19-201ENST00000390846 128 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 RNU6-855P-201ENST00000410395 104 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.82□□□□□ -1.96
RAPGEF3O95398 SNORD2.1-201ENST00000458762 69 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 COX6CP14-201ENST00000469580 174 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 AC011406.1-201ENST00000512440 370 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 AL137100.2-201ENST00000555786 315 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.82□□□□□ -1.96
RAPGEF3O95398 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
RAPGEF3O95398 AC010297.1-201ENST00000623948 149 ntBASIC2.82□□□□□ -1.96
RAPGEF3O95398 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RAPGEF3O95398 SNORD114-6-201ENST00000364393 72 ntBASIC2.81□□□□□ -1.96
RAPGEF3O95398 RNU6-407P-201ENST00000365280 104 ntBASIC2.81□□□□□ -1.96
RAPGEF3O95398 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.81□□□□□ -1.96
RAPGEF3O95398 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.81□□□□□ -1.96
RAPGEF3O95398 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.81□□□□□ -1.96
RAPGEF3O95398 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.81□□□□□ -1.96
RAPGEF3O95398 MIR6895-201ENST00000613497 78 ntBASIC2.81□□□□□ -1.96
RAPGEF3O95398 AC073349.3-201ENST00000617616 186 ntBASIC2.81□□□□□ -1.96
RAPGEF3O95398 ZNF271P-202ENST00000465539 1970 ntBASIC2.81□□□□□ -1.96
RAPGEF3O95398 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
RAPGEF3O95398 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAPGEF3O95398 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.8□□□□□ -1.96
RAPGEF3O95398 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RAPGEF3O95398 Y_RNA.76-201ENST00000362931 109 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 Y_RNA.124-201ENST00000363339 93 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 RNU6-392P-201ENST00000364926 101 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 Y_RNA.310-201ENST00000365063 113 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 Y_RNA.341-201ENST00000365341 102 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 RPS27P22-201ENST00000478056 241 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.8□□□□□ -1.96
RAPGEF3O95398 Y_RNA.700-201ENST00000516806 100 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 MIR4255-201ENST00000579351 72 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 AL442067.1-201ENST00000613261 223 ntBASIC2.8□□□□□ -1.96
RAPGEF3O95398 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.8□□□□□ -1.96
RAPGEF3O95398 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.8□□□□□ -1.96
RAPGEF3O95398 snoU2-30.2-201ENST00000362805 70 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 Y_RNA.117-201ENST00000363294 101 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 RNU6-200P-201ENST00000364743 107 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 DEFA7P-201ENST00000382676 285 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 RNU2-14P-201ENST00000411053 191 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.79□□□□□ -1.96
RAPGEF3O95398 RNA5SP480-201ENST00000516840 109 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 AC027419.1-201ENST00000522976 328 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 snoU18.1-201ENST00000629629 71 ntBASIC2.79□□□□□ -1.96
RAPGEF3O95398 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
RAPGEF3O95398 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
RAPGEF3O95398 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RAPGEF3O95398 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
RAPGEF3O95398 Y_RNA.200-201ENST00000364018 102 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 RNU6-801P-201ENST00000364087 105 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 RNA5SP493-201ENST00000364115 91 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 RNU6-1164P-201ENST00000364428 107 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 Y_RNA.287-201ENST00000364853 94 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 Y_RNA.327-201ENST00000365201 102 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 HMGN2P34-201ENST00000437647 269 ntBASIC2.78□□□□□ -1.96
RAPGEF3O95398 ATP5J2P3-201ENST00000451550 258 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms