Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MIR1267-201ENST00000408723 78 ntBASIC1.64□□□□□ -2.15
GPC4O75487 MIR1252-201ENST00000408861 65 ntBASIC1.64□□□□□ -2.15
GPC4O75487 AC113618.1-201ENST00000416747 285 ntBASIC1.64□□□□□ -2.15
GPC4O75487 RNU7-94P-201ENST00000459576 63 ntBASIC1.64□□□□□ -2.15
GPC4O75487 RNU6-1278P-201ENST00000516130 107 ntBASIC1.64□□□□□ -2.15
GPC4O75487 RNU6-1291P-201ENST00000516591 104 ntBASIC1.64□□□□□ -2.15
GPC4O75487 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
GPC4O75487 AC015720.1-201ENST00000565251 277 ntBASIC1.64□□□□□ -2.15
GPC4O75487 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
GPC4O75487 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.64□□□□□ -2.15
GPC4O75487 Y_RNA.202-201ENST00000364083 110 ntBASIC1.63□□□□□ -2.15
GPC4O75487 SNORA33.2-201ENST00000365413 134 ntBASIC1.63□□□□□ -2.15
GPC4O75487 RPL23AP36-201ENST00000413895 458 ntBASIC1.63□□□□□ -2.15
GPC4O75487 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.63□□□□□ -2.15
GPC4O75487 HSPE1P13-201ENST00000451143 297 ntBASIC1.63□□□□□ -2.15
GPC4O75487 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
GPC4O75487 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.63□□□□□ -2.15
GPC4O75487 Y_RNA.721-201ENST00000517207 102 ntBASIC1.63□□□□□ -2.15
GPC4O75487 AC113195.1-201ENST00000579952 141 ntBASIC1.63□□□□□ -2.15
GPC4O75487 MIR3145-201ENST00000580727 82 ntBASIC1.63□□□□□ -2.15
GPC4O75487 MIR4300-201ENST00000581016 96 ntBASIC1.63□□□□□ -2.15
GPC4O75487 DEFB117-201ENST00000602356 141 ntBASIC1.63□□□□□ -2.15
GPC4O75487 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
GPC4O75487 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
GPC4O75487 SNORA1B-201ENST00000362535 133 ntBASIC1.62□□□□□ -2.15
GPC4O75487 SNORA63.7-201ENST00000365579 123 ntBASIC1.62□□□□□ -2.15
GPC4O75487 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
GPC4O75487 RNU6-121P-201ENST00000410525 99 ntBASIC1.62□□□□□ -2.15
GPC4O75487 RN7SKP200-201ENST00000410564 320 ntBASIC1.62□□□□□ -2.15
GPC4O75487 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.62□□□□□ -2.15
GPC4O75487 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.62□□□□□ -2.15
GPC4O75487 RNU6-237P-201ENST00000515985 71 ntBASIC1.62□□□□□ -2.15
GPC4O75487 SNORA70.12-201ENST00000516084 153 ntBASIC1.62□□□□□ -2.15
GPC4O75487 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
GPC4O75487 RNU6-341P-201ENST00000516973 96 ntBASIC1.62□□□□□ -2.15
GPC4O75487 Y_RNA.713-201ENST00000517013 96 ntBASIC1.62□□□□□ -2.15
GPC4O75487 SNORA44.1-201ENST00000517031 108 ntBASIC1.62□□□□□ -2.15
GPC4O75487 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
GPC4O75487 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.62□□□□□ -2.15
GPC4O75487 Y_RNA.183-201ENST00000363882 113 ntBASIC1.61□□□□□ -2.15
GPC4O75487 Y_RNA.214-201ENST00000364201 112 ntBASIC1.61□□□□□ -2.15
GPC4O75487 RNU6-806P-201ENST00000365147 105 ntBASIC1.61□□□□□ -2.15
GPC4O75487 Y_RNA.455-201ENST00000384230 98 ntBASIC1.61□□□□□ -2.15
GPC4O75487 RNU6-102P-201ENST00000384485 104 ntBASIC1.61□□□□□ -2.15
GPC4O75487 Y_RNA.602-201ENST00000410535 92 ntBASIC1.61□□□□□ -2.15
GPC4O75487 AC004965.1-201ENST00000413033 213 ntBASIC1.61□□□□□ -2.15
GPC4O75487 AL390729.2-201ENST00000416137 156 ntBASIC1.61□□□□□ -2.15
GPC4O75487 ELOCP20-201ENST00000422460 345 ntBASIC1.61□□□□□ -2.15
GPC4O75487 FTH1P12-201ENST00000432137 551 ntBASIC1.61□□□□□ -2.15
GPC4O75487 AL162725.1-201ENST00000435405 301 ntBASIC1.61□□□□□ -2.15
GPC4O75487 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
GPC4O75487 MTATP8P1-201ENST00000467115 207 ntBASIC1.61□□□□□ -2.15
GPC4O75487 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
GPC4O75487 RNU6-1096P-201ENST00000517089 102 ntBASIC1.61□□□□□ -2.15
GPC4O75487 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
GPC4O75487 MIR4769-201ENST00000584126 77 ntBASIC1.61□□□□□ -2.15
GPC4O75487 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
GPC4O75487 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
GPC4O75487 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
GPC4O75487 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
GPC4O75487 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
GPC4O75487 MIR302D-201ENST00000362275 68 ntBASIC1.6□□□□□ -2.15
GPC4O75487 Y_RNA.26-201ENST00000362539 101 ntBASIC1.6□□□□□ -2.15
GPC4O75487 SNORD113-8-201ENST00000363497 74 ntBASIC1.6□□□□□ -2.15
GPC4O75487 Y_RNA.153-201ENST00000363615 91 ntBASIC1.6□□□□□ -2.15
GPC4O75487 Y_RNA.210-201ENST00000364161 110 ntBASIC1.6□□□□□ -2.15
GPC4O75487 RNU6-21P-201ENST00000384710 107 ntBASIC1.6□□□□□ -2.15
GPC4O75487 SNORD115-46-201ENST00000390982 71 ntBASIC1.6□□□□□ -2.15
GPC4O75487 RNU6-482P-201ENST00000391068 107 ntBASIC1.6□□□□□ -2.15
GPC4O75487 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
GPC4O75487 AL135790.2-201ENST00000437701 267 ntBASIC1.6□□□□□ -2.15
GPC4O75487 STAG3L5P-204ENST00000443759 179 ntBASIC1.6□□□□□ -2.15
GPC4O75487 RPS4XP11-201ENST00000446897 772 ntBASIC1.6□□□□□ -2.15
GPC4O75487 HSPE1P24-201ENST00000450782 238 ntBASIC1.6□□□□□ -2.15
GPC4O75487 AC233266.1-201ENST00000454518 96 ntBASIC1.6□□□□□ -2.15
GPC4O75487 AC098869.1-201ENST00000481627 292 ntBASIC1.6□□□□□ -2.15
GPC4O75487 RNY3P15-201ENST00000516297 97 ntBASIC1.6□□□□□ -2.15
GPC4O75487 AC131281.1-201ENST00000522984 164 ntBASIC1.6□□□□□ -2.15
GPC4O75487 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.6□□□□□ -2.15
GPC4O75487 AC004832.4-201ENST00000608952 331 ntBASIC1.6□□□□□ -2.15
GPC4O75487 AC242852.1-201ENST00000612151 96 ntBASIC1.6□□□□□ -2.15
GPC4O75487 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
GPC4O75487 AC244015.1-201ENST00000622301 99 ntBASIC1.6□□□□□ -2.15
GPC4O75487 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
GPC4O75487 Y_RNA.380-201ENST00000365663 111 ntBASIC1.59□□□□□ -2.15
GPC4O75487 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
GPC4O75487 RNU6-1011P-201ENST00000384668 107 ntBASIC1.59□□□□□ -2.15
GPC4O75487 AL590004.1-201ENST00000405321 300 ntBASIC1.59□□□□□ -2.15
GPC4O75487 RPS20P10-201ENST00000451209 253 ntBASIC1.59□□□□□ -2.15
GPC4O75487 HSPE1P25-201ENST00000455484 251 ntBASIC1.59□□□□□ -2.15
GPC4O75487 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
GPC4O75487 SEPT14P8-201ENST00000508026 178 ntBASIC1.59□□□□□ -2.15
GPC4O75487 AC015688.6-201ENST00000577737 104 ntBASIC1.59□□□□□ -2.15
GPC4O75487 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.59□□□□□ -2.15
GPC4O75487 MIR376A1-201ENST00000616574 68 ntBASIC1.59□□□□□ -2.15
GPC4O75487 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
GPC4O75487 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
GPC4O75487 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
GPC4O75487 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
GPC4O75487 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms