Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MTND4LP30-201ENST00000454092 297 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 RNA5SP233-201ENST00000459153 113 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 RNU7-94P-201ENST00000459576 63 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.27□□□□□ -2.05
CTNND1O60716 RNU6-63P-201ENST00000516690 95 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
CTNND1O60716 AC010900.2-201ENST00000604508 210 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 AC037487.3-201ENST00000606668 112 ntBASIC2.27□□□□□ -2.05
CTNND1O60716 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CTNND1O60716 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CTNND1O60716 RNU4-80P-201ENST00000363200 141 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 SNORA63D-201ENST00000364359 132 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 RNA5SP338-201ENST00000410495 85 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 RNU2-7P-201ENST00000410794 178 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.26□□□□□ -2.05
CTNND1O60716 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.26□□□□□ -2.05
CTNND1O60716 RNU6-1338P-201ENST00000516328 91 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.26□□□□□ -2.05
CTNND1O60716 SNRPGP19-201ENST00000603826 189 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 AC018630.2-201ENST00000534866 2403 ntBASIC2.26□□□□□ -2.05
CTNND1O60716 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.16-201ENST00000362421 102 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.341-201ENST00000365341 102 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.368-201ENST00000365547 113 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.25□□□□□ -2.05
CTNND1O60716 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.456-201ENST00000384232 111 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.461-201ENST00000384263 103 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RNU6-136P-201ENST00000384663 107 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.556-201ENST00000384677 113 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 MT-TW-201ENST00000387382 68 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RNU6-855P-201ENST00000410395 104 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RNA5SP511-201ENST00000410487 115 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 AC009310.1-201ENST00000414414 451 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RPL23AP6-201ENST00000446637 472 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RPL36AP21-201ENST00000490372 323 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RPL23AP63-201ENST00000498752 471 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RNU6-191P-201ENST00000516295 94 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.676-201ENST00000516393 96 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 MIR514B-201ENST00000516774 80 ntBASIC2.25□□□□□ -2.05
CTNND1O60716 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
CTNND1O60716 Y_RNA.172-201ENST00000363765 102 ntBASIC2.24□□□□□ -2.05
CTNND1O60716 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.24□□□□□ -2.05
CTNND1O60716 MTCO1P5-201ENST00000433573 344 ntBASIC2.24□□□□□ -2.05
CTNND1O60716 AL162725.1-201ENST00000435405 301 ntBASIC2.24□□□□□ -2.05
CTNND1O60716 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.24□□□□□ -2.05
CTNND1O60716 DEFB108E-201ENST00000524692 240 ntBASIC2.24□□□□□ -2.05
CTNND1O60716 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.24□□□□□ -2.05
CTNND1O60716 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.24□□□□□ -2.05
CTNND1O60716 MIR6079-201ENST00000635807 62 ntBASIC2.24□□□□□ -2.05
CTNND1O60716 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CTNND1O60716 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CTNND1O60716 Y_RNA.310-201ENST00000365063 113 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 RNU6-472P-201ENST00000384299 107 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.23□□□□□ -2.05
CTNND1O60716 RPS20P10-201ENST00000451209 253 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 AL021397.1-201ENST00000451806 248 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 SERF1AP1-201ENST00000514575 187 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 RNU1-40P-201ENST00000516816 164 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 RNU1-97P-201ENST00000516872 164 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 AC015720.1-201ENST00000565251 277 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 MIR4299-201ENST00000577899 72 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 MIR3683-201ENST00000580847 82 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 AL512605.2-201ENST00000592972 256 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 AP001282.2-201ENST00000616149 309 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.23□□□□□ -2.05
CTNND1O60716 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
CTNND1O60716 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CTNND1O60716 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CTNND1O60716 AL391987.6-201ENST00000305671 199 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 SNORA25.1-201ENST00000362326 128 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 Y_RNA.338-201ENST00000365320 114 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 RNU6-514P-201ENST00000384208 107 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 Y_RNA.483-201ENST00000384380 101 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 SNORD116-13-201ENST00000384408 92 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 MIR562-201ENST00000384894 95 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 MIR520G-201ENST00000385064 90 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CTNND1O60716 RNA5SP109-201ENST00000391010 116 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC003989.2-201ENST00000440224 169 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 RPS27P1-201ENST00000450552 247 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC025033.1-201ENST00000463883 194 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC107393.1-201ENST00000512403 346 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 RNA5SP481-201ENST00000516814 122 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 SNORA31.17-201ENST00000516953 127 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 SCARNA24.2-201ENST00000516968 130 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC136628.3-201ENST00000521868 290 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC022217.4-201ENST00000604389 163 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC005972.2-201ENST00000604690 348 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 AC004832.4-201ENST00000608952 331 ntBASIC2.22□□□□□ -2.05
CTNND1O60716 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
CTNND1O60716 MIR335-201ENST00000362173 94 ntBASIC2.21□□□□□ -2.06
CTNND1O60716 RNU4-13P-201ENST00000364019 141 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms