Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA12O60330 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA12O60330 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 RNA5SP511-201ENST00000410487 115 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA12O60330 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA12O60330 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA12O60330 AL163195.1-201ENST00000496941 348 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 RNU6-341P-201ENST00000516973 96 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 MIR5688-201ENST00000580619 83 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 AP003357.1-201ENST00000604497 148 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 AC141273.2-201ENST00000618989 130 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 snoU18.1-201ENST00000629629 71 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 MIR6079-201ENST00000635807 62 ntBASIC2.37□□□□□ -2.03
PCDHGA12O60330 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA12O60330 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA12O60330 Y_RNA.60-201ENST00000362831 98 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 Y_RNA.122-201ENST00000363331 96 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 RNU6-379P-201ENST00000363813 104 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 SNORD114-30-201ENST00000364448 72 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 SNORA72-201ENST00000384339 132 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 BTF3P11-201ENST00000426582 477 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 MTND1P19-201ENST00000511780 315 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 SNORA31.11-201ENST00000516528 139 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 RNU7-128P-201ENST00000517247 62 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 SUB1P4-201ENST00000566062 339 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 POLR3GP1-201ENST00000594073 261 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 AC013791.1-201ENST00000616619 62 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 MIR548AY-201ENST00000617669 107 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 U6.108-201ENST00000637764 58 ntBASIC2.36□□□□□ -2.03
PCDHGA12O60330 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
PCDHGA12O60330 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA12O60330 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
PCDHGA12O60330 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA12O60330 SNORD116-13-201ENST00000384408 92 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 MIR520A-201ENST00000384862 85 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 RNU6-763P-201ENST00000390865 106 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 AC104332.1-201ENST00000440471 797 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 SNORD2.1-201ENST00000458762 69 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 Y_RNA.637-201ENST00000459424 114 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 COX6CP14-201ENST00000469580 174 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 RNU6-63P-201ENST00000516690 95 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 AC015712.3-201ENST00000559380 164 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 MIR5692C2-201ENST00000577959 77 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
PCDHGA12O60330 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA12O60330 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHGA12O60330 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGA12O60330 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGA12O60330 SNORD114-1-201ENST00000362705 72 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 Y_RNA.65-201ENST00000362846 100 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 RNU6-211P-201ENST00000384047 107 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 RNU7-141P-201ENST00000459304 62 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHGA12O60330 AC010900.2-201ENST00000604508 210 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 AL442067.1-201ENST00000613261 223 ntBASIC2.34□□□□□ -2.03
PCDHGA12O60330 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PCDHGA12O60330 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
PCDHGA12O60330 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNU6-1205P-201ENST00000363625 106 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 Y_RNA.172-201ENST00000363765 102 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNY1-201ENST00000364228 113 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNU6-136P-201ENST00000384663 107 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 SNORA26.5-201ENST00000391215 123 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 MTCO2P33-201ENST00000402100 465 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNU2-7P-201ENST00000410794 178 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 AL158823.1-201ENST00000418441 478 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA12O60330 AL135790.2-201ENST00000437701 267 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNVU1-2-201ENST00000516326 135 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 Y_RNA.680-201ENST00000516441 93 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNU6-1096P-201ENST00000517089 102 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 RNU6-111P-201ENST00000517179 105 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA12O60330 AP002004.2-201ENST00000531656 154 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 MIR2681-201ENST00000581814 105 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 AC091178.2-201ENST00000584401 117 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 AC005357.1-201ENST00000588399 301 ntBASIC2.33□□□□□ -2.04
PCDHGA12O60330 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA12O60330 Y_RNA.117-201ENST00000363294 101 ntBASIC2.32□□□□□ -2.04
PCDHGA12O60330 U8.7-201ENST00000364940 136 ntBASIC2.32□□□□□ -2.04
PCDHGA12O60330 Y_RNA.539-201ENST00000384635 107 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 336.1 ms