Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC084768.2-201ENST00000622736 221 ntBASIC1.59□□□□□ -2.15
SSX4O60224 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
SSX4O60224 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.59□□□□□ -2.15
SSX4O60224 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
SSX4O60224 SNORD81.1-201ENST00000363064 77 ntBASIC1.58□□□□□ -2.16
SSX4O60224 Y_RNA.267-201ENST00000364679 109 ntBASIC1.58□□□□□ -2.16
SSX4O60224 RNU11-5P-201ENST00000391216 129 ntBASIC1.58□□□□□ -2.16
SSX4O60224 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.58□□□□□ -2.16
SSX4O60224 HSPE1P13-201ENST00000451143 297 ntBASIC1.58□□□□□ -2.16
SSX4O60224 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.58□□□□□ -2.16
SSX4O60224 AC008834.1-201ENST00000511612 175 ntBASIC1.58□□□□□ -2.16
SSX4O60224 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.58□□□□□ -2.16
SSX4O60224 RNU6-897P-201ENST00000517135 105 ntBASIC1.58□□□□□ -2.16
SSX4O60224 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.58□□□□□ -2.16
SSX4O60224 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
SSX4O60224 AC091178.2-201ENST00000584401 117 ntBASIC1.58□□□□□ -2.16
SSX4O60224 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.58□□□□□ -2.16
SSX4O60224 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
SSX4O60224 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.58□□□□□ -2.16
SSX4O60224 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.58□□□□□ -2.16
SSX4O60224 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
SSX4O60224 SNORA33.2-201ENST00000365413 134 ntBASIC1.57□□□□□ -2.16
SSX4O60224 Y_RNA.455-201ENST00000384230 98 ntBASIC1.57□□□□□ -2.16
SSX4O60224 RNU6-21P-201ENST00000384710 107 ntBASIC1.57□□□□□ -2.16
SSX4O60224 RNU6-1031P-201ENST00000384773 107 ntBASIC1.57□□□□□ -2.16
SSX4O60224 RNA5SP511-201ENST00000410487 115 ntBASIC1.57□□□□□ -2.16
SSX4O60224 RN7SKP200-201ENST00000410564 320 ntBASIC1.57□□□□□ -2.16
SSX4O60224 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
SSX4O60224 AC010655.3-201ENST00000478818 450 ntBASIC1.57□□□□□ -2.16
SSX4O60224 AC099513.1-201ENST00000490423 301 ntBASIC1.57□□□□□ -2.16
SSX4O60224 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.57□□□□□ -2.16
SSX4O60224 RNU6-1137P-201ENST00000517073 99 ntBASIC1.57□□□□□ -2.16
SSX4O60224 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SSX4O60224 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
SSX4O60224 AC022140.2-201ENST00000623500 188 ntBASIC1.57□□□□□ -2.16
SSX4O60224 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.57□□□□□ -2.16
SSX4O60224 Y_RNA.172-201ENST00000363765 102 ntBASIC1.56□□□□□ -2.16
SSX4O60224 Y_RNA.183-201ENST00000363882 113 ntBASIC1.56□□□□□ -2.16
SSX4O60224 Y_RNA.380-201ENST00000365663 111 ntBASIC1.56□□□□□ -2.16
SSX4O60224 SNORD116-13-201ENST00000384408 92 ntBASIC1.56□□□□□ -2.16
SSX4O60224 AL161935.2-201ENST00000414627 60 ntBASIC1.56□□□□□ -2.16
SSX4O60224 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.56□□□□□ -2.16
SSX4O60224 snoU13.9-201ENST00000458927 103 ntBASIC1.56□□□□□ -2.16
SSX4O60224 RNU6-1291P-201ENST00000516591 104 ntBASIC1.56□□□□□ -2.16
SSX4O60224 RNU6-341P-201ENST00000516973 96 ntBASIC1.56□□□□□ -2.16
SSX4O60224 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.56□□□□□ -2.16
SSX4O60224 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
SSX4O60224 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.56□□□□□ -2.16
SSX4O60224 AC113195.1-201ENST00000579952 141 ntBASIC1.56□□□□□ -2.16
SSX4O60224 AC021506.2-201ENST00000612354 169 ntBASIC1.56□□□□□ -2.16
SSX4O60224 MIR376A1-201ENST00000616574 68 ntBASIC1.56□□□□□ -2.16
SSX4O60224 Y_RNA.238-201ENST00000364441 102 ntBASIC1.55□□□□□ -2.16
SSX4O60224 Y_RNA.286-201ENST00000364813 102 ntBASIC1.55□□□□□ -2.16
SSX4O60224 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
SSX4O60224 MIR520G-201ENST00000385064 90 ntBASIC1.55□□□□□ -2.16
SSX4O60224 SNORA12.1-201ENST00000390873 148 ntBASIC1.55□□□□□ -2.16
SSX4O60224 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
SSX4O60224 AL162725.1-201ENST00000435405 301 ntBASIC1.55□□□□□ -2.16
SSX4O60224 RNU6-1096P-201ENST00000517089 102 ntBASIC1.55□□□□□ -2.16
SSX4O60224 MIR4300-201ENST00000581016 96 ntBASIC1.55□□□□□ -2.16
SSX4O60224 DEFB117-201ENST00000602356 141 ntBASIC1.55□□□□□ -2.16
SSX4O60224 MIR378A-201ENST00000362177 66 ntBASIC1.54□□□□□ -2.16
SSX4O60224 Y_RNA.4-201ENST00000362333 112 ntBASIC1.54□□□□□ -2.16
SSX4O60224 SNORA1B-201ENST00000362535 133 ntBASIC1.54□□□□□ -2.16
SSX4O60224 MIR562-201ENST00000384894 95 ntBASIC1.54□□□□□ -2.16
SSX4O60224 MIR9-3-201ENST00000385084 90 ntBASIC1.54□□□□□ -2.16
SSX4O60224 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.54□□□□□ -2.16
SSX4O60224 STAG3L5P-204ENST00000443759 179 ntBASIC1.54□□□□□ -2.16
SSX4O60224 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
SSX4O60224 AC233266.1-201ENST00000454518 96 ntBASIC1.54□□□□□ -2.16
SSX4O60224 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.54□□□□□ -2.16
SSX4O60224 SEPT14P8-201ENST00000508026 178 ntBASIC1.54□□□□□ -2.16
SSX4O60224 RNU6-1053P-201ENST00000515930 101 ntBASIC1.54□□□□□ -2.16
SSX4O60224 RNU2-56P-201ENST00000516826 190 ntBASIC1.54□□□□□ -2.16
SSX4O60224 AC131281.1-201ENST00000522984 164 ntBASIC1.54□□□□□ -2.16
SSX4O60224 MIR3145-201ENST00000580727 82 ntBASIC1.54□□□□□ -2.16
SSX4O60224 SNORD113-5-201ENST00000607261 78 ntBASIC1.54□□□□□ -2.16
SSX4O60224 AC242852.1-201ENST00000612151 96 ntBASIC1.54□□□□□ -2.16
SSX4O60224 AC244015.1-201ENST00000622301 99 ntBASIC1.54□□□□□ -2.16
SSX4O60224 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
SSX4O60224 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.54□□□□□ -2.16
SSX4O60224 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SSX4O60224 Y_RNA.105-201ENST00000363182 111 ntBASIC1.53□□□□□ -2.16
SSX4O60224 SNORD113-8-201ENST00000363497 74 ntBASIC1.53□□□□□ -2.16
SSX4O60224 RNU6-457P-201ENST00000363999 107 ntBASIC1.53□□□□□ -2.16
SSX4O60224 Y_RNA.265-201ENST00000364677 108 ntBASIC1.53□□□□□ -2.16
SSX4O60224 RNU6-338P-201ENST00000383888 105 ntBASIC1.53□□□□□ -2.16
SSX4O60224 RNU6-639P-201ENST00000384074 107 ntBASIC1.53□□□□□ -2.16
SSX4O60224 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
SSX4O60224 SNORD115-46-201ENST00000390982 71 ntBASIC1.53□□□□□ -2.16
SSX4O60224 SNORA17.3-201ENST00000391159 129 ntBASIC1.53□□□□□ -2.16
SSX4O60224 MIR934-201ENST00000401241 83 ntBASIC1.53□□□□□ -2.16
SSX4O60224 AL034345.1-201ENST00000407768 123 ntBASIC1.53□□□□□ -2.16
SSX4O60224 RNU6-710P-201ENST00000410424 105 ntBASIC1.53□□□□□ -2.16
SSX4O60224 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
SSX4O60224 ELOCP20-201ENST00000422460 345 ntBASIC1.53□□□□□ -2.16
SSX4O60224 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX4O60224 ICE2P2-201ENST00000483823 2787 ntBASIC1.53□□□□□ -2.16
SSX4O60224 RNU6-764P-201ENST00000516396 105 ntBASIC1.53□□□□□ -2.16
SSX4O60224 SNORA40.15-201ENST00000516884 107 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms