Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SNORA33-201ENST00000363664 130 ntBASIC2.12□□□□□ -2.07
NCK2O43639 RNU6-117P-201ENST00000365415 107 ntBASIC2.12□□□□□ -2.07
NCK2O43639 MIR520G-201ENST00000385064 90 ntBASIC2.12□□□□□ -2.07
NCK2O43639 RNU4-30P-201ENST00000410245 143 ntBASIC2.12□□□□□ -2.07
NCK2O43639 RNU2-7P-201ENST00000410794 178 ntBASIC2.12□□□□□ -2.07
NCK2O43639 RNU6-321P-201ENST00000410912 106 ntBASIC2.12□□□□□ -2.07
NCK2O43639 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.12□□□□□ -2.07
NCK2O43639 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.12□□□□□ -2.07
NCK2O43639 AC010409.1-201ENST00000487382 476 ntBASIC2.12□□□□□ -2.07
NCK2O43639 AC008737.2-201ENST00000599446 118 ntBASIC2.12□□□□□ -2.07
NCK2O43639 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
NCK2O43639 AL360085.1-201ENST00000604713 532 ntBASIC2.12□□□□□ -2.07
NCK2O43639 AL353621.2-201ENST00000605340 133 ntBASIC2.12□□□□□ -2.07
NCK2O43639 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
NCK2O43639 AC018630.2-201ENST00000534866 2403 ntBASIC2.12□□□□□ -2.07
NCK2O43639 RNU6-661P-201ENST00000362409 107 ntBASIC2.11□□□□□ -2.07
NCK2O43639 Y_RNA.124-201ENST00000363339 93 ntBASIC2.11□□□□□ -2.07
NCK2O43639 Y_RNA.136-201ENST00000363444 102 ntBASIC2.11□□□□□ -2.07
NCK2O43639 Y_RNA.796-201ENST00000364268 102 ntBASIC2.11□□□□□ -2.07
NCK2O43639 Y_RNA.799-201ENST00000364992 102 ntBASIC2.11□□□□□ -2.07
NCK2O43639 Y_RNA.329-201ENST00000365209 107 ntBASIC2.11□□□□□ -2.07
NCK2O43639 RNU6-376P-201ENST00000384731 106 ntBASIC2.11□□□□□ -2.07
NCK2O43639 RNU6-713P-201ENST00000384761 107 ntBASIC2.11□□□□□ -2.07
NCK2O43639 RNU6-360P-201ENST00000390944 104 ntBASIC2.11□□□□□ -2.07
NCK2O43639 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.11□□□□□ -2.07
NCK2O43639 RNU6-1045P-201ENST00000516321 107 ntBASIC2.11□□□□□ -2.07
NCK2O43639 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.11□□□□□ -2.07
NCK2O43639 AL117187.1-201ENST00000555482 181 ntBASIC2.11□□□□□ -2.07
NCK2O43639 AC136443.5-201ENST00000603741 370 ntBASIC2.11□□□□□ -2.07
NCK2O43639 AC073413.2-201ENST00000604332 360 ntBASIC2.11□□□□□ -2.07
NCK2O43639 AC037487.3-201ENST00000606668 112 ntBASIC2.11□□□□□ -2.07
NCK2O43639 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.11□□□□□ -2.07
NCK2O43639 U6.104-201ENST00000637979 90 ntBASIC2.11□□□□□ -2.07
NCK2O43639 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NCK2O43639 RNU6-290P-201ENST00000365212 101 ntBASIC2.1□□□□□ -2.07
NCK2O43639 Y_RNA.383-201ENST00000383855 97 ntBASIC2.1□□□□□ -2.07
NCK2O43639 SNORA67.5-201ENST00000391036 107 ntBASIC2.1□□□□□ -2.07
NCK2O43639 MIR548F4-201ENST00000408515 105 ntBASIC2.1□□□□□ -2.07
NCK2O43639 HSPE1P25-201ENST00000455484 251 ntBASIC2.1□□□□□ -2.07
NCK2O43639 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.1□□□□□ -2.07
NCK2O43639 RNU6-327P-201ENST00000516270 127 ntBASIC2.1□□□□□ -2.07
NCK2O43639 RNU6-966P-201ENST00000516479 104 ntBASIC2.1□□□□□ -2.07
NCK2O43639 SNORA31.17-201ENST00000516953 127 ntBASIC2.1□□□□□ -2.07
NCK2O43639 AL358944.1-201ENST00000528537 144 ntBASIC2.1□□□□□ -2.07
NCK2O43639 AP003733.2-201ENST00000529409 171 ntBASIC2.1□□□□□ -2.07
NCK2O43639 MIR6079-201ENST00000635807 62 ntBASIC2.1□□□□□ -2.07
NCK2O43639 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
NCK2O43639 Y_RNA.456-201ENST00000384232 111 ntBASIC2.09□□□□□ -2.07
NCK2O43639 SNORA53-201ENST00000391141 249 ntBASIC2.09□□□□□ -2.07
NCK2O43639 RNU6-121P-201ENST00000410525 99 ntBASIC2.09□□□□□ -2.07
NCK2O43639 Y_RNA.602-201ENST00000410535 92 ntBASIC2.09□□□□□ -2.07
NCK2O43639 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.09□□□□□ -2.07
NCK2O43639 HMGN1P10-201ENST00000474557 553 ntBASIC2.09□□□□□ -2.07
NCK2O43639 SNORA25.15-201ENST00000516487 89 ntBASIC2.09□□□□□ -2.07
NCK2O43639 RNU6-1337P-201ENST00000516525 95 ntBASIC2.09□□□□□ -2.07
NCK2O43639 RNU6-341P-201ENST00000516973 96 ntBASIC2.09□□□□□ -2.07
NCK2O43639 AL359851.1-201ENST00000569460 4997 ntBASIC2.09□□□□□ -2.08
NCK2O43639 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NCK2O43639 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NCK2O43639 Y_RNA.176-201ENST00000363815 109 ntBASIC2.08□□□□□ -2.08
NCK2O43639 SNORA25.9-201ENST00000365087 128 ntBASIC2.08□□□□□ -2.08
NCK2O43639 RNA5SP190-201ENST00000365222 118 ntBASIC2.08□□□□□ -2.08
NCK2O43639 RNU6-326P-201ENST00000365480 107 ntBASIC2.08□□□□□ -2.08
NCK2O43639 Y_RNA.368-201ENST00000365547 113 ntBASIC2.08□□□□□ -2.08
NCK2O43639 Y_RNA.569-201ENST00000384749 103 ntBASIC2.08□□□□□ -2.08
NCK2O43639 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NCK2O43639 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
NCK2O43639 BTF3P4-201ENST00000418852 495 ntBASIC2.08□□□□□ -2.08
NCK2O43639 AL162725.1-201ENST00000435405 301 ntBASIC2.08□□□□□ -2.08
NCK2O43639 U8.19-201ENST00000459095 133 ntBASIC2.08□□□□□ -2.08
NCK2O43639 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
NCK2O43639 SNORA44.1-201ENST00000517031 108 ntBASIC2.08□□□□□ -2.08
NCK2O43639 AL162424.1-201ENST00000602325 221 ntBASIC2.08□□□□□ -2.08
NCK2O43639 AL359821.1-201ENST00000605519 182 ntBASIC2.08□□□□□ -2.08
NCK2O43639 AC099654.10-201ENST00000640395 161 ntBASIC2.08□□□□□ -2.08
NCK2O43639 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NCK2O43639 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
NCK2O43639 Y_RNA.105-201ENST00000363182 111 ntBASIC2.07□□□□□ -2.08
NCK2O43639 Y_RNA.286-201ENST00000364813 102 ntBASIC2.07□□□□□ -2.08
NCK2O43639 Y_RNA.355-201ENST00000365462 98 ntBASIC2.07□□□□□ -2.08
NCK2O43639 Y_RNA.459-201ENST00000384251 102 ntBASIC2.07□□□□□ -2.08
NCK2O43639 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NCK2O43639 SNORA17.3-201ENST00000391159 129 ntBASIC2.07□□□□□ -2.08
NCK2O43639 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
NCK2O43639 HSPE1P9-201ENST00000440046 311 ntBASIC2.07□□□□□ -2.08
NCK2O43639 RPS27P1-201ENST00000450552 247 ntBASIC2.07□□□□□ -2.08
NCK2O43639 TRMT112P2-201ENST00000512910 132 ntBASIC2.07□□□□□ -2.08
NCK2O43639 RNU6-635P-201ENST00000516651 102 ntBASIC2.07□□□□□ -2.08
NCK2O43639 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.07□□□□□ -2.08
NCK2O43639 DEFB117-201ENST00000602356 141 ntBASIC2.07□□□□□ -2.08
NCK2O43639 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
NCK2O43639 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.07□□□□□ -2.08
NCK2O43639 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NCK2O43639 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
NCK2O43639 Y_RNA.118-201ENST00000363300 101 ntBASIC2.06□□□□□ -2.08
NCK2O43639 Y_RNA.149-201ENST00000363558 117 ntBASIC2.06□□□□□ -2.08
NCK2O43639 MIR518E-201ENST00000385252 88 ntBASIC2.06□□□□□ -2.08
NCK2O43639 RNU6-855P-201ENST00000410395 104 ntBASIC2.06□□□□□ -2.08
NCK2O43639 RN7SKP200-201ENST00000410564 320 ntBASIC2.06□□□□□ -2.08
NCK2O43639 COX6CP10-201ENST00000416832 224 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms