Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RNU6-985P-201ENST00000410182 104 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 Y_RNA.602-201ENST00000410535 92 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 RNU2-61P-201ENST00000411069 191 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 RNA5SP247-201ENST00000411181 105 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 HSPE1P13-201ENST00000451143 297 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.66□□□□□ -2.14
SMAD9O15198 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.66□□□□□ -2.14
SMAD9O15198 SEPT14P8-201ENST00000508026 178 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 AC108729.3-201ENST00000513484 108 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 RNY3P15-201ENST00000516297 97 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 AL929325.1-201ENST00000603096 117 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 MIR8074-201ENST00000615081 81 ntBASIC1.66□□□□□ -2.14
SMAD9O15198 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.66□□□□□ -2.14
SMAD9O15198 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SMAD9O15198 SNORD81.1-201ENST00000363064 77 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 SNORD113-8-201ENST00000363497 74 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 Y_RNA.326-201ENST00000365176 113 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 MIR30A-201ENST00000385092 71 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 RNU6-440P-201ENST00000390882 105 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 AL590004.1-201ENST00000405321 300 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 SUMO2P12-201ENST00000405924 140 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 AC006504.6-201ENST00000590142 199 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 DEFB117-201ENST00000602356 141 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 AC100821.1-201ENST00000523153 2479 ntBASIC1.65□□□□□ -2.15
SMAD9O15198 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SMAD9O15198 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SMAD9O15198 RNU4-13P-201ENST00000364019 141 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 Y_RNA.286-201ENST00000364813 102 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 MIR562-201ENST00000384894 95 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 AL078595.1-201ENST00000404458 226 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 RNU6-855P-201ENST00000410395 104 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 RNU6-710P-201ENST00000410424 105 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 RNA5SP511-201ENST00000410487 115 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 RN7SKP200-201ENST00000410564 320 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 CYCSP49-201ENST00000420810 319 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 AC024067.1-201ENST00000426199 223 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 POLR2KP2-201ENST00000438155 177 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 AC233266.1-201ENST00000454518 96 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
SMAD9O15198 SNORA31.10-201ENST00000516482 106 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 RNU6-1291P-201ENST00000516591 104 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 MIR3145-201ENST00000580727 82 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.64□□□□□ -2.15
SMAD9O15198 Y_RNA.812-201ENST00000610788 101 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 AC242852.1-201ENST00000612151 96 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 Y_RNA.784-201ENST00000613803 101 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 Y_RNA.787-201ENST00000616522 101 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 Y_RNA.780-201ENST00000617336 101 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 Y_RNA.801-201ENST00000619005 101 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 AC244015.1-201ENST00000622301 99 ntBASIC1.64□□□□□ -2.15
SMAD9O15198 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.64□□□□□ -2.15
SMAD9O15198 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SMAD9O15198 MIR126-201ENST00000362291 85 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 Y_RNA.4-201ENST00000362333 112 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 Y_RNA.19-201ENST00000362462 99 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 Y_RNA.153-201ENST00000363615 91 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 RNU6-770P-201ENST00000363929 105 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 Y_RNA.214-201ENST00000364201 112 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 Y_RNA.383-201ENST00000383855 97 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 SNORD116-13-201ENST00000384408 92 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 SNORD115-46-201ENST00000390982 71 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 AC113618.1-201ENST00000416747 285 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 ELOCP20-201ENST00000422460 345 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 JTBP1-201ENST00000441314 247 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 AC010655.3-201ENST00000478818 450 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.63□□□□□ -2.15
SMAD9O15198 MRPS35P2-201ENST00000508242 191 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 RNU6-341P-201ENST00000516973 96 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 RNU6-1096P-201ENST00000517089 102 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.63□□□□□ -2.15
SMAD9O15198 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.63□□□□□ -2.15
SMAD9O15198 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
SMAD9O15198 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.63□□□□□ -2.15
SMAD9O15198 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.63□□□□□ -2.15
SMAD9O15198 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
SMAD9O15198 Y_RNA.105-201ENST00000363182 111 ntBASIC1.62□□□□□ -2.15
SMAD9O15198 Y_RNA.172-201ENST00000363765 102 ntBASIC1.62□□□□□ -2.15
SMAD9O15198 Y_RNA.276-201ENST00000364732 109 ntBASIC1.62□□□□□ -2.15
SMAD9O15198 MIR520G-201ENST00000385064 90 ntBASIC1.62□□□□□ -2.15
SMAD9O15198 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.62□□□□□ -2.15
SMAD9O15198 AL162725.1-201ENST00000435405 301 ntBASIC1.62□□□□□ -2.15
SMAD9O15198 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.62□□□□□ -2.15
SMAD9O15198 AC091178.2-201ENST00000584401 117 ntBASIC1.62□□□□□ -2.15
SMAD9O15198 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.62□□□□□ -2.15
SMAD9O15198 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
SMAD9O15198 RNU4-90P-201ENST00000362773 141 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 Y_RNA.265-201ENST00000364677 108 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 RNU6-203P-201ENST00000384038 104 ntBASIC1.61□□□□□ -2.15
SMAD9O15198 RNU6-102P-201ENST00000384485 104 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms