Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.23□□□□□ -2.61
CHD1O14646 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 AC023442.1-201ENST00000531247 422 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 AC108747.1-201ENST00000609508 535 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 U7.6-201ENST00000610841 64 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 MIR1246-201ENST00000636535 73 ntBASIC-1.23□□□□□ -2.61
CHD1O14646 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 RNU6-376P-201ENST00000384731 106 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.24□□□□□ -2.61
CHD1O14646 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.24□□□□□ -2.61
CHD1O14646 RNU6-706P-201ENST00000517229 104 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 RNU6-323P-201ENST00000521915 107 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 AC068587.4-201ENST00000533893 186 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 AC123904.2-201ENST00000548059 300 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 MIR3118-1-201ENST00000581787 76 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 AC073539.2-201ENST00000597113 165 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 AC006380.1-201ENST00000603598 186 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 AC068137.4-201ENST00000638485 296 ntBASIC-1.24□□□□□ -2.61
CHD1O14646 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.25□□□□□ -2.61
CHD1O14646 RNA5SP470-201ENST00000516463 106 ntBASIC-1.25□□□□□ -2.61
CHD1O14646 MIR4752-201ENST00000579672 72 ntBASIC-1.25□□□□□ -2.61
CHD1O14646 MIR4762-201ENST00000585261 75 ntBASIC-1.25□□□□□ -2.61
CHD1O14646 SNORD11B-201ENST00000607707 90 ntBASIC-1.25□□□□□ -2.61
CHD1O14646 MIR7844-201ENST00000616161 122 ntBASIC-1.25□□□□□ -2.61
CHD1O14646 AC134878.1-201ENST00000619901 243 ntBASIC-1.25□□□□□ -2.61
CHD1O14646 SNORD56.2-201ENST00000363242 71 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNU6-723P-201ENST00000383973 107 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 SNORA24.1-201ENST00000384401 135 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNA5SP494-201ENST00000410653 129 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AC244250.2-201ENST00000418731 148 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AL355994.1-201ENST00000424379 260 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AC010598.1-201ENST00000510378 103 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNU6-504P-201ENST00000516568 104 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AC097460.3-201ENST00000623099 442 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AC091948.2-201ENST00000636510 279 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNU4-21P-201ENST00000362802 126 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNU6-116P-201ENST00000384042 109 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.26□□□□□ -2.61
CHD1O14646 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNA5SP47-201ENST00000517230 109 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AP002802.2-201ENST00000605877 235 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 AC245008.1-201ENST00000608123 476 ntBASIC-1.26□□□□□ -2.61
CHD1O14646 RNA5SP20-201ENST00000515976 84 ntBASIC-1.27□□□□□ -2.61
CHD1O14646 MIR6507-201ENST00000613630 70 ntBASIC-1.27□□□□□ -2.61
CHD1O14646 AC022306.3-201ENST00000619930 550 ntBASIC-1.27□□□□□ -2.61
CHD1O14646 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 MIR215-201ENST00000384858 110 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 RNU6-855P-201ENST00000410395 104 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 AL390729.2-201ENST00000416137 156 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 AL117339.3-201ENST00000418733 162 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 PRDX4P1-201ENST00000507189 574 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 FGF7P1-201ENST00000582820 288 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 MIR4677-201ENST00000584153 80 ntBASIC-1.28□□□□□ -2.61
CHD1O14646 RNU6-827P-201ENST00000365553 106 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 SNORD28-201ENST00000384706 75 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 EPS15P1-201ENST00000448836 336 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AC245297.2-201ENST00000610119 565 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AL445984.1-201ENST00000637834 659 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AC099786.3-201ENST00000565735 1410 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 SNORD38B-201ENST00000384690 67 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 FCF1P9-201ENST00000412546 282 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.29□□□□□ -2.62
CHD1O14646 SUMO1P3-201ENST00000439961 304 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 MRPS10P1-201ENST00000448483 130 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AL031274.1-201ENST00000450334 232 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 snoU13.6-201ENST00000458785 104 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.29□□□□□ -2.62
CHD1O14646 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 AC244669.1-204ENST00000621564 178 ntBASIC-1.29□□□□□ -2.62
CHD1O14646 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.3□□□□□ -2.62
CHD1O14646 MIR148A-201ENST00000362215 68 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 SNORA26.5-201ENST00000391215 123 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 RNU6-370P-201ENST00000411008 104 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 AC116353.2-201ENST00000505332 712 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.3□□□□□ -2.62
CHD1O14646 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.3□□□□□ -2.62
CHD1O14646 AC010205.1-201ENST00000616668 449 ntBASIC-1.3□□□□□ -2.62
CHD1O14646 MIR873-201ENST00000401120 77 ntBASIC-1.31□□□□□ -2.62
CHD1O14646 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.31□□□□□ -2.62
CHD1O14646 AC022960.3-201ENST00000619794 441 ntBASIC-1.31□□□□□ -2.62
CHD1O14646 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 SNORA63C-201ENST00000364578 129 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 RNU6-769P-201ENST00000384407 104 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 AC005776.1-201ENST00000603164 290 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 AC105081.1-201ENST00000617727 106 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.32□□□□□ -2.62
CHD1O14646 MIR570-201ENST00000384917 97 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms