Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-593P-201ENST00000364716 112 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RNU6-407P-201ENST00000365280 104 ntBASIC1.12□□□□□ -2.23
CUX2O14529 SNORA2A-201ENST00000383885 135 ntBASIC1.12□□□□□ -2.23
CUX2O14529 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
CUX2O14529 SNORA22C-201ENST00000384614 134 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RNU2-70P-201ENST00000410718 179 ntBASIC1.12□□□□□ -2.23
CUX2O14529 MTCO3P19-201ENST00000415864 321 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RPS3AP52-201ENST00000435639 297 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RPL39P38-201ENST00000467018 153 ntBASIC1.12□□□□□ -2.23
CUX2O14529 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.12□□□□□ -2.23
CUX2O14529 Y_RNA.708-201ENST00000516950 96 ntBASIC1.12□□□□□ -2.23
CUX2O14529 AC068790.6-201ENST00000602558 258 ntBASIC1.12□□□□□ -2.23
CUX2O14529 AL390123.1-201ENST00000603216 237 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RNU4-76P-201ENST00000364509 141 ntBASIC1.12□□□□□ -2.23
CUX2O14529 Y_RNA.267-201ENST00000364679 109 ntBASIC1.12□□□□□ -2.23
CUX2O14529 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.12□□□□□ -2.23
CUX2O14529 Y_RNA.594-201ENST00000410373 140 ntBASIC1.12□□□□□ -2.23
CUX2O14529 FCF1P9-201ENST00000412546 282 ntBASIC1.12□□□□□ -2.23
CUX2O14529 ELOCP21-201ENST00000412558 336 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RPL37P10-201ENST00000412884 288 ntBASIC1.12□□□□□ -2.23
CUX2O14529 MRPS10P1-201ENST00000448483 130 ntBASIC1.12□□□□□ -2.23
CUX2O14529 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.12□□□□□ -2.23
CUX2O14529 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
CUX2O14529 AC011352.1-201ENST00000512300 793 ntBASIC1.12□□□□□ -2.23
CUX2O14529 Y_RNA.655-201ENST00000515919 96 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RNU6-947P-201ENST00000516264 106 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
CUX2O14529 RNU7-128P-201ENST00000517247 62 ntBASIC1.12□□□□□ -2.23
CUX2O14529 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.12□□□□□ -2.23
CUX2O14529 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.12□□□□□ -2.23
CUX2O14529 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.12□□□□□ -2.23
CUX2O14529 MIR6079-201ENST00000635807 62 ntBASIC1.12□□□□□ -2.23
CUX2O14529 Y_RNA.482-201ENST00000384377 111 ntBASIC1.11□□□□□ -2.23
CUX2O14529 AL355796.1-201ENST00000406706 323 ntBASIC1.11□□□□□ -2.23
CUX2O14529 MIR548K-201ENST00000408406 116 ntBASIC1.11□□□□□ -2.23
CUX2O14529 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.11□□□□□ -2.23
CUX2O14529 DYNLT3P2-201ENST00000442517 295 ntBASIC1.11□□□□□ -2.23
CUX2O14529 RNU7-28P-201ENST00000516759 62 ntBASIC1.11□□□□□ -2.23
CUX2O14529 SNORA70.22-201ENST00000517160 124 ntBASIC1.11□□□□□ -2.23
CUX2O14529 AC104260.1-201ENST00000616660 539 ntBASIC1.11□□□□□ -2.23
CUX2O14529 AC068647.2-201ENST00000637380 353 ntBASIC1.11□□□□□ -2.23
CUX2O14529 MIR6866-201ENST00000638146 69 ntBASIC1.11□□□□□ -2.23
CUX2O14529 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CUX2O14529 Y_RNA.358-201ENST00000365491 99 ntBASIC1.1□□□□□ -2.23
CUX2O14529 RNU6-1310P-201ENST00000384153 107 ntBASIC1.1□□□□□ -2.23
CUX2O14529 RNU6-1001P-201ENST00000411265 100 ntBASIC1.1□□□□□ -2.23
CUX2O14529 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.1□□□□□ -2.23
CUX2O14529 RNU7-12P-201ENST00000516030 62 ntBASIC1.1□□□□□ -2.23
CUX2O14529 RNA5SP168-201ENST00000516642 112 ntBASIC1.1□□□□□ -2.23
CUX2O14529 RNU2-56P-201ENST00000516826 190 ntBASIC1.1□□□□□ -2.23
CUX2O14529 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
CUX2O14529 AC018448.1-201ENST00000552843 316 ntBASIC1.1□□□□□ -2.23
CUX2O14529 MIR5701-3-201ENST00000578890 82 ntBASIC1.1□□□□□ -2.23
CUX2O14529 MIR5701-1-201ENST00000585138 82 ntBASIC1.1□□□□□ -2.23
CUX2O14529 GHRLOS.1-201ENST00000610995 70 ntBASIC1.1□□□□□ -2.23
CUX2O14529 MIR5701-2-201ENST00000615634 82 ntBASIC1.1□□□□□ -2.23
CUX2O14529 AC092794.2-201ENST00000620933 563 ntBASIC1.1□□□□□ -2.23
CUX2O14529 RNY4P3-201ENST00000365254 95 ntBASIC1.09□□□□□ -2.24
CUX2O14529 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.24
CUX2O14529 RNU6-601P-201ENST00000384540 107 ntBASIC1.09□□□□□ -2.24
CUX2O14529 RNU6-136P-201ENST00000384663 107 ntBASIC1.09□□□□□ -2.24
CUX2O14529 MIR660-201ENST00000385235 97 ntBASIC1.09□□□□□ -2.24
CUX2O14529 MIR548F5-201ENST00000408421 86 ntBASIC1.09□□□□□ -2.24
CUX2O14529 AC114482.1-201ENST00000418010 247 ntBASIC1.09□□□□□ -2.24
CUX2O14529 AC092423.1-201ENST00000430165 186 ntBASIC1.09□□□□□ -2.24
CUX2O14529 STAG3L5P-204ENST00000443759 179 ntBASIC1.09□□□□□ -2.24
CUX2O14529 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.09□□□□□ -2.24
CUX2O14529 AL049830.1-201ENST00000468034 425 ntBASIC1.09□□□□□ -2.24
CUX2O14529 AC097462.1-201ENST00000514125 324 ntBASIC1.09□□□□□ -2.24
CUX2O14529 RNU6-1016P-201ENST00000516689 94 ntBASIC1.09□□□□□ -2.24
CUX2O14529 RNU6-307P-201ENST00000516743 106 ntBASIC1.09□□□□□ -2.24
CUX2O14529 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.24
CUX2O14529 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.09□□□□□ -2.24
CUX2O14529 AC005014.2-201ENST00000607795 599 ntBASIC1.09□□□□□ -2.24
CUX2O14529 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.09□□□□□ -2.24
CUX2O14529 AC127459.3-201ENST00000624328 466 ntBASIC1.09□□□□□ -2.24
CUX2O14529 RNU6-376P-201ENST00000384731 106 ntBASIC1.08□□□□□ -2.24
CUX2O14529 AL353997.1-201ENST00000432936 108 ntBASIC1.08□□□□□ -2.24
CUX2O14529 AC233266.1-201ENST00000454518 96 ntBASIC1.08□□□□□ -2.24
CUX2O14529 RPL17P19-201ENST00000489069 552 ntBASIC1.08□□□□□ -2.24
CUX2O14529 RNU6-341P-201ENST00000516973 96 ntBASIC1.08□□□□□ -2.24
CUX2O14529 AC105029.1-201ENST00000520250 669 ntBASIC1.08□□□□□ -2.24
CUX2O14529 AP003327.1-201ENST00000529684 127 ntBASIC1.08□□□□□ -2.24
CUX2O14529 AC242852.1-201ENST00000612151 96 ntBASIC1.08□□□□□ -2.24
CUX2O14529 AC244015.1-201ENST00000622301 99 ntBASIC1.08□□□□□ -2.24
CUX2O14529 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CUX2O14529 RNU6-199P-201ENST00000362954 107 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU6-1264P-201ENST00000383891 107 ntBASIC1.07□□□□□ -2.24
CUX2O14529 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.07□□□□□ -2.24
CUX2O14529 RPL7P42-201ENST00000481005 679 ntBASIC1.07□□□□□ -2.24
CUX2O14529 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU6-322P-201ENST00000516010 103 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU6-1278P-201ENST00000516130 107 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU6-358P-201ENST00000516564 75 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU6-229P-201ENST00000516614 102 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU7-30P-201ENST00000516835 62 ntBASIC1.07□□□□□ -2.24
CUX2O14529 RNU6-264P-201ENST00000517134 104 ntBASIC1.07□□□□□ -2.24
CUX2O14529 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.07□□□□□ -2.24
CUX2O14529 MIR4778-201ENST00000577635 80 ntBASIC1.07□□□□□ -2.24
CUX2O14529 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms