Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC093027.1-201ENST00000546698 429 ntBASIC0.29□□□□□ -2.36
UPK2O00526 MIR5000-201ENST00000577717 103 ntBASIC0.29□□□□□ -2.36
UPK2O00526 MIR3674-201ENST00000636576 68 ntBASIC0.29□□□□□ -2.36
UPK2O00526 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
UPK2O00526 RNU6-874P-201ENST00000362390 105 ntBASIC0.28□□□□□ -2.36
UPK2O00526 RNY1P16-201ENST00000363063 111 ntBASIC0.28□□□□□ -2.36
UPK2O00526 RNA5SP48-201ENST00000363969 126 ntBASIC0.28□□□□□ -2.36
UPK2O00526 U8.5-201ENST00000364528 136 ntBASIC0.28□□□□□ -2.36
UPK2O00526 SNORD113.3-201ENST00000364630 78 ntBASIC0.28□□□□□ -2.36
UPK2O00526 RNU6-596P-201ENST00000365395 98 ntBASIC0.28□□□□□ -2.36
UPK2O00526 Y_RNA.490-201ENST00000384413 102 ntBASIC0.28□□□□□ -2.36
UPK2O00526 SNORA2B-201ENST00000384583 137 ntBASIC0.28□□□□□ -2.36
UPK2O00526 MIR190B-201ENST00000401119 79 ntBASIC0.28□□□□□ -2.36
UPK2O00526 MIR1827-201ENST00000408549 66 ntBASIC0.28□□□□□ -2.36
UPK2O00526 MIR1302-7-201ENST00000408841 72 ntBASIC0.28□□□□□ -2.36
UPK2O00526 RNA5SP475-201ENST00000410568 110 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AC244023.1-201ENST00000426884 112 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
UPK2O00526 RNU6-1088P-201ENST00000516850 104 ntBASIC0.28□□□□□ -2.36
UPK2O00526 NBR2-204ENST00000587322 63 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AC012433.1-201ENST00000588916 398 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AC242498.1-201ENST00000604134 111 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AC243994.1-201ENST00000618627 109 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AP000770.2-201ENST00000623694 100 ntBASIC0.28□□□□□ -2.36
UPK2O00526 AC090617.10-201ENST00000624308 134 ntBASIC0.28□□□□□ -2.36
UPK2O00526 MIR6516-201ENST00000630554 81 ntBASIC0.28□□□□□ -2.36
UPK2O00526 RNY3P3-201ENST00000363816 102 ntBASIC0.27□□□□□ -2.37
UPK2O00526 Y_RNA.473-201ENST00000384333 102 ntBASIC0.27□□□□□ -2.37
UPK2O00526 Y_RNA.557-201ENST00000384680 107 ntBASIC0.27□□□□□ -2.37
UPK2O00526 Y_RNA.638-201ENST00000459374 113 ntBASIC0.27□□□□□ -2.37
UPK2O00526 SNORD123-201ENST00000459473 70 ntBASIC0.27□□□□□ -2.37
UPK2O00526 AC010486.3-201ENST00000511602 785 ntBASIC0.27□□□□□ -2.37
UPK2O00526 AC074133.1-201ENST00000515696 183 ntBASIC0.27□□□□□ -2.37
UPK2O00526 RNU6-1337P-201ENST00000516525 95 ntBASIC0.27□□□□□ -2.37
UPK2O00526 MIR151B-201ENST00000584249 96 ntBASIC0.27□□□□□ -2.37
UPK2O00526 MIR4762-201ENST00000585261 75 ntBASIC0.27□□□□□ -2.37
UPK2O00526 AF250324.2-201ENST00000608299 610 ntBASIC0.27□□□□□ -2.37
UPK2O00526 MIR6128-201ENST00000615528 109 ntBASIC0.27□□□□□ -2.37
UPK2O00526 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
UPK2O00526 MIR410-201ENST00000362222 80 ntBASIC0.26□□□□□ -2.37
UPK2O00526 RNU6-1090P-201ENST00000364065 94 ntBASIC0.26□□□□□ -2.37
UPK2O00526 Y_RNA.364-201ENST00000365532 101 ntBASIC0.26□□□□□ -2.37
UPK2O00526 AC117470.1-201ENST00000381974 330 ntBASIC0.26□□□□□ -2.37
UPK2O00526 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
UPK2O00526 AL392103.1-201ENST00000447000 198 ntBASIC0.26□□□□□ -2.37
UPK2O00526 SNORA40.9-201ENST00000515895 93 ntBASIC0.26□□□□□ -2.37
UPK2O00526 RN7SKP12-201ENST00000516275 143 ntBASIC0.26□□□□□ -2.37
UPK2O00526 RNU7-43P-201ENST00000516554 64 ntBASIC0.26□□□□□ -2.37
UPK2O00526 SNORD45.4-201ENST00000516629 73 ntBASIC0.26□□□□□ -2.37
UPK2O00526 RNU1-54P-201ENST00000517181 120 ntBASIC0.26□□□□□ -2.37
UPK2O00526 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.26□□□□□ -2.37
UPK2O00526 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.26□□□□□ -2.37
UPK2O00526 AC024614.3-201ENST00000637860 256 ntBASIC0.26□□□□□ -2.37
UPK2O00526 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
UPK2O00526 MIR1-1-201ENST00000362147 71 ntBASIC0.25□□□□□ -2.37
UPK2O00526 RNU6-1084P-201ENST00000362498 107 ntBASIC0.25□□□□□ -2.37
UPK2O00526 Y_RNA.243-201ENST00000364481 109 ntBASIC0.25□□□□□ -2.37
UPK2O00526 Y_RNA.253-201ENST00000364562 112 ntBASIC0.25□□□□□ -2.37
UPK2O00526 SNORA25.9-201ENST00000365087 128 ntBASIC0.25□□□□□ -2.37
UPK2O00526 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.25□□□□□ -2.37
UPK2O00526 SNORA25.10-201ENST00000515926 124 ntBASIC0.25□□□□□ -2.37
UPK2O00526 MIR5701-3-201ENST00000578890 82 ntBASIC0.25□□□□□ -2.37
UPK2O00526 MIR5701-1-201ENST00000585138 82 ntBASIC0.25□□□□□ -2.37
UPK2O00526 AC005014.2-201ENST00000607795 599 ntBASIC0.25□□□□□ -2.37
UPK2O00526 MIR5701-2-201ENST00000615634 82 ntBASIC0.25□□□□□ -2.37
UPK2O00526 MIRLET7D-201ENST00000362263 87 ntBASIC0.24□□□□□ -2.37
UPK2O00526 Y_RNA.4-201ENST00000362333 112 ntBASIC0.24□□□□□ -2.37
UPK2O00526 RNU6-318P-201ENST00000384283 103 ntBASIC0.24□□□□□ -2.37
UPK2O00526 MIR522-201ENST00000385071 87 ntBASIC0.24□□□□□ -2.37
UPK2O00526 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.24□□□□□ -2.37
UPK2O00526 AC005534.2-201ENST00000431047 433 ntBASIC0.24□□□□□ -2.37
UPK2O00526 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.24□□□□□ -2.37
UPK2O00526 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.24□□□□□ -2.37
UPK2O00526 RNU6-864P-201ENST00000516256 108 ntBASIC0.24□□□□□ -2.37
UPK2O00526 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
UPK2O00526 RNU11-2P-201ENST00000516898 142 ntBASIC0.24□□□□□ -2.37
UPK2O00526 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
UPK2O00526 AC008133.2-201ENST00000624540 351 ntBASIC0.24□□□□□ -2.37
UPK2O00526 MIR4251-201ENST00000635819 61 ntBASIC0.24□□□□□ -2.37
UPK2O00526 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.24□□□□□ -2.37
UPK2O00526 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
UPK2O00526 SNORD28B-201ENST00000390993 75 ntBASIC0.23□□□□□ -2.37
UPK2O00526 RNU6-1148P-201ENST00000410992 104 ntBASIC0.23□□□□□ -2.37
UPK2O00526 RNU6-177P-201ENST00000411257 104 ntBASIC0.23□□□□□ -2.37
UPK2O00526 AL353997.1-201ENST00000432936 108 ntBASIC0.23□□□□□ -2.37
UPK2O00526 NDUFA4P2-201ENST00000489989 244 ntBASIC0.23□□□□□ -2.37
UPK2O00526 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.23□□□□□ -2.37
UPK2O00526 RNU6-496P-201ENST00000516145 99 ntBASIC0.23□□□□□ -2.37
UPK2O00526 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
UPK2O00526 MIR6513-201ENST00000621188 64 ntBASIC0.23□□□□□ -2.37
UPK2O00526 MIR1321-201ENST00000637766 79 ntBASIC0.23□□□□□ -2.37
UPK2O00526 Y_RNA.148-201ENST00000363557 117 ntBASIC0.22□□□□□ -2.37
UPK2O00526 Y_RNA.172-201ENST00000363765 102 ntBASIC0.22□□□□□ -2.37
UPK2O00526 SNORD50B-201ENST00000364995 70 ntBASIC0.22□□□□□ -2.37
UPK2O00526 Y_RNA.358-201ENST00000365491 99 ntBASIC0.22□□□□□ -2.37
UPK2O00526 RNU6-831P-201ENST00000384548 107 ntBASIC0.22□□□□□ -2.37
UPK2O00526 MIR570-201ENST00000384917 97 ntBASIC0.22□□□□□ -2.37
UPK2O00526 MIR15B-201ENST00000385045 98 ntBASIC0.22□□□□□ -2.37
UPK2O00526 RNU6-700P-201ENST00000391043 107 ntBASIC0.22□□□□□ -2.37
UPK2O00526 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms