Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3BM21 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3BM21 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
H3BM21 SNORD115-28-201ENST00000363931 81 ntBASIC3.63□□□□□ -1.83
H3BM21 MIR491-201ENST00000384877 84 ntBASIC3.63□□□□□ -1.83
H3BM21 MIR183-201ENST00000384958 110 ntBASIC3.63□□□□□ -1.83
H3BM21 RNU4-37P-201ENST00000410214 84 ntBASIC3.63□□□□□ -1.83
H3BM21 AL035398.1-201ENST00000430869 322 ntBASIC3.63□□□□□ -1.83
H3BM21 RNU7-80P-201ENST00000459562 61 ntBASIC3.63□□□□□ -1.83
H3BM21 RN7SL293P-201ENST00000481765 281 ntBASIC3.63□□□□□ -1.83
H3BM21 RNU7-25P-201ENST00000516544 62 ntBASIC3.63□□□□□ -1.83
H3BM21 AC004812.1-201ENST00000540773 146 ntBASIC3.63□□□□□ -1.83
H3BM21 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.63□□□□□ -1.83
H3BM21 AC008739.2-201ENST00000597006 317 ntBASIC3.63□□□□□ -1.83
H3BM21 AC103810.7-201ENST00000607821 91 ntBASIC3.63□□□□□ -1.83
H3BM21 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.63□□□□□ -1.83
H3BM21 AC073308.1-201ENST00000623696 305 ntBASIC3.63□□□□□ -1.83
H3BM21 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
H3BM21 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.63□□□□□ -1.83
H3BM21 AC009487.4-201ENST00000624969 3585 ntBASIC3.63□□□□□ -1.83
H3BM21 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.63□□□□□ -1.83
H3BM21 AF117829.1-206ENST00000621883 3802 ntBASIC3.63□□□□□ -1.83
H3BM21 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
H3BM21 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
H3BM21 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3BM21 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
H3BM21 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
H3BM21 RNU6-1235P-201ENST00000384559 107 ntBASIC3.62□□□□□ -1.83
H3BM21 MIR802-201ENST00000390235 94 ntBASIC3.62□□□□□ -1.83
H3BM21 RNA5SP144-201ENST00000410846 116 ntBASIC3.62□□□□□ -1.83
H3BM21 AC099677.2-201ENST00000436385 175 ntBASIC3.62□□□□□ -1.83
H3BM21 RNA5SP310-201ENST00000459084 116 ntBASIC3.62□□□□□ -1.83
H3BM21 RNU6-498P-201ENST00000459468 107 ntBASIC3.62□□□□□ -1.83
H3BM21 RPL30P14-201ENST00000482744 348 ntBASIC3.62□□□□□ -1.83
H3BM21 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
H3BM21 AC093729.1-201ENST00000513074 128 ntBASIC3.62□□□□□ -1.83
H3BM21 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.62□□□□□ -1.83
H3BM21 AC008011.1-201ENST00000545989 227 ntBASIC3.62□□□□□ -1.83
H3BM21 U6.105-201ENST00000637379 88 ntBASIC3.62□□□□□ -1.83
H3BM21 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3BM21 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
H3BM21 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.61□□□□□ -1.83
H3BM21 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
H3BM21 AC007656.2-201ENST00000624902 4547 ntBASIC3.61□□□□□ -1.83
H3BM21 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
H3BM21 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H3BM21 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H3BM21 RNA5SP50-201ENST00000363731 107 ntBASIC3.61□□□□□ -1.83
H3BM21 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.61□□□□□ -1.83
H3BM21 AC233266.1-201ENST00000454518 96 ntBASIC3.61□□□□□ -1.83
H3BM21 AC093259.1-201ENST00000509755 300 ntBASIC3.61□□□□□ -1.83
H3BM21 SNORA18.7-201ENST00000516910 131 ntBASIC3.61□□□□□ -1.83
H3BM21 AC002984.1-201ENST00000591692 448 ntBASIC3.61□□□□□ -1.83
H3BM21 AC242852.1-201ENST00000612151 96 ntBASIC3.61□□□□□ -1.83
H3BM21 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.61□□□□□ -1.83
H3BM21 AC244015.1-201ENST00000622301 99 ntBASIC3.61□□□□□ -1.83
H3BM21 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
H3BM21 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.61□□□□□ -1.83
H3BM21 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
H3BM21 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.6□□□□□ -1.83
H3BM21 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
H3BM21 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
H3BM21 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
H3BM21 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3BM21 RNU6-315P-201ENST00000362666 107 ntBASIC3.6□□□□□ -1.83
H3BM21 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
H3BM21 MIR1265-201ENST00000408444 86 ntBASIC3.6□□□□□ -1.83
H3BM21 RN7SKP200-201ENST00000410564 320 ntBASIC3.6□□□□□ -1.83
H3BM21 AL022718.1-201ENST00000412004 84 ntBASIC3.6□□□□□ -1.83
H3BM21 AC023141.4-201ENST00000412031 328 ntBASIC3.6□□□□□ -1.83
H3BM21 CYCSP4-201ENST00000429682 331 ntBASIC3.6□□□□□ -1.83
H3BM21 AL445646.1-201ENST00000431784 216 ntBASIC3.6□□□□□ -1.83
H3BM21 AC112771.1-201ENST00000463581 102 ntBASIC3.6□□□□□ -1.83
H3BM21 AC006445.1-201ENST00000491925 405 ntBASIC3.6□□□□□ -1.83
H3BM21 SNORA70.24-201ENST00000517233 118 ntBASIC3.6□□□□□ -1.83
H3BM21 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
H3BM21 MIR3922-201ENST00000585192 84 ntBASIC3.6□□□□□ -1.83
H3BM21 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.6□□□□□ -1.83
H3BM21 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
H3BM21 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
H3BM21 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3BM21 OTUD4P1-201ENST00000237841 3067 ntBASIC3.6□□□□□ -1.83
H3BM21 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H3BM21 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H3BM21 AC073346.2-201ENST00000624724 2058 ntBASIC3.59□□□□□ -1.83
H3BM21 AC005336.3-201ENST00000623833 2679 ntBASIC3.59□□□□□ -1.83
H3BM21 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
H3BM21 MIR126-201ENST00000362291 85 ntBASIC3.59□□□□□ -1.83
H3BM21 SNORD31B-201ENST00000364977 69 ntBASIC3.59□□□□□ -1.83
H3BM21 Y_RNA.547-201ENST00000384654 119 ntBASIC3.59□□□□□ -1.83
H3BM21 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
H3BM21 Y_RNA.714-201ENST00000517065 90 ntBASIC3.59□□□□□ -1.83
H3BM21 AC078899.2-201ENST00000595282 212 ntBASIC3.59□□□□□ -1.83
H3BM21 MIR7975-201ENST00000619350 68 ntBASIC3.59□□□□□ -1.83
H3BM21 Y_RNA.788-201ENST00000622394 112 ntBASIC3.59□□□□□ -1.83
H3BM21 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
H3BM21 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
H3BM21 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
H3BM21 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H3BM21 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms