Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 AC096644.4-201ENST00000563417 2912 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3□□□□□ -1.93
UPK3BL1B0FP48 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPK3BL1B0FP48 snoU2-30.2-201ENST00000362805 70 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 RNU6-1209P-201ENST00000363655 107 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 RNU6-1082P-201ENST00000364574 107 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 RNU6-1138P-201ENST00000365359 106 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 MIR562-201ENST00000384894 95 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 RNA5SP274-201ENST00000410484 108 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
UPK3BL1B0FP48 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3□□□□□ -1.93
UPK3BL1B0FP48 AC026271.5-201ENST00000577873 130 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 AC007229.1-201ENST00000590455 412 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 AL353149.1-201ENST00000610667 244 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3□□□□□ -1.93
UPK3BL1B0FP48 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3□□□□□ -1.93
UPK3BL1B0FP48 FAM35CP-201ENST00000554755 2470 ntBASIC3□□□□□ -1.93
UPK3BL1B0FP48 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 RNU6-160P-201ENST00000384591 107 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.584-201ENST00000391090 114 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 RPS15AP28-201ENST00000435088 386 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 HMGN2P34-201ENST00000437647 269 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 AL109933.2-201ENST00000452651 260 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 RNU2-56P-201ENST00000516826 190 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 RNU6-1096P-201ENST00000517089 102 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK3BL1B0FP48 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNU6-834P-201ENST00000362367 110 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.634-201ENST00000364811 113 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.353-201ENST00000365440 108 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNU6-805P-201ENST00000365643 106 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 MIR1261-201ENST00000408659 82 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNA5SP293-201ENST00000410527 113 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNU2-70P-201ENST00000410718 179 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNU1-131P-201ENST00000458943 161 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNU6-237P-201ENST00000515985 71 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RN7SKP132-201ENST00000516001 208 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 RNU6-1234P-201ENST00000516877 103 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 AC007536.1-201ENST00000533382 349 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 AC091178.2-201ENST00000584401 117 ntBASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
UPK3BL1B0FP48 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 SNORD56.5-201ENST00000364281 72 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.563-201ENST00000384707 108 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 SNORA46-201ENST00000384762 135 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 AC244505.4-201ENST00000434905 287 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 SSXP5-201ENST00000443473 287 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 OR9P1P-201ENST00000496431 281 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 RN7SKP179-201ENST00000516126 217 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 AL358944.1-201ENST00000528537 144 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 AL359075.3-201ENST00000613288 217 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 JPX_2.1-201ENST00000614161 69 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 MIR338-201ENST00000636369 67 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 AC018630.2-201ENST00000534866 2403 ntBASIC2.97□□□□□ -1.93
UPK3BL1B0FP48 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.93
UPK3BL1B0FP48 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
UPK3BL1B0FP48 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RNY1P11-201ENST00000363759 113 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RNU6-915P-201ENST00000364943 103 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RNU6-1186P-201ENST00000410429 97 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 AC018634.1-201ENST00000437554 401 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RPL39P40-201ENST00000445481 146 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 AC108938.1-201ENST00000451204 136 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RN7SL633P-201ENST00000488974 297 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RN7SL636P-201ENST00000497504 294 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RNU6-659P-201ENST00000516454 104 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 RN7SKP282-201ENST00000516824 299 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 AC073413.2-201ENST00000604332 360 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 Pinc.1-201ENST00000616452 154 ntBASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
UPK3BL1B0FP48 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 SNORA38-201ENST00000363946 132 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 SNORA9.2-201ENST00000365361 133 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 MIR515-2-201ENST00000384883 83 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 MIR515-1-201ENST00000384884 83 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 UQCRHP3-201ENST00000451503 251 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
UPK3BL1B0FP48 RNU7-149P-201ENST00000516739 59 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms