Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL359075.3-201ENST00000613288 217 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 MIR8054-201ENST00000620877 86 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 SNORA22B-201ENST00000383876 138 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 MTCO2P33-201ENST00000402100 465 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 CCDC58P2-201ENST00000417131 366 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 MTND1P4-201ENST00000435196 415 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-1.06□□□□□ -2.58
COL6A5A8TX70 RNU6-202P-201ENST00000515998 96 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 AC024995.1-201ENST00000523014 93 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 MRPS36P5-201ENST00000551909 298 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 AP001330.5-201ENST00000607176 411 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 AC244669.1-204ENST00000621564 178 ntBASIC-1.06□□□□□ -2.58
COL6A5A8TX70 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.06□□□□□ -2.58
COL6A5A8TX70 snoZ40.1-201ENST00000364540 72 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-900P-201ENST00000384498 102 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-658P-201ENST00000384606 106 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-695P-201ENST00000391157 104 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AL354692.1-201ENST00000423044 315 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-469P-201ENST00000516253 101 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AC008521.1-201ENST00000587471 187 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.07□□□□□ -2.58
COL6A5A8TX70 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 SNORD114-13-201ENST00000364377 74 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-484P-201ENST00000384016 107 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-975P-201ENST00000384296 105 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 MTCO1P17-201ENST00000411522 491 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.07□□□□□ -2.58
COL6A5A8TX70 snoU13.14-201ENST00000459372 104 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 RNU6-135P-201ENST00000516769 101 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 BNIP3P30-201ENST00000601184 574 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AC079610.2-201ENST00000604818 690 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 AL359880.1-201ENST00000621879 266 ntBASIC-1.07□□□□□ -2.58
COL6A5A8TX70 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 ELOCP20-201ENST00000422460 345 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 SERF1AP1-201ENST00000514575 187 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 RNU7-156P-201ENST00000517214 74 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 MIR4782-201ENST00000577987 79 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AL390123.1-201ENST00000603216 237 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC121247.2-201ENST00000604776 136 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AL139022.2-201ENST00000606934 443 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC132825.7-201ENST00000638744 335 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 SNORD28-201ENST00000384706 75 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 RNU6-535P-201ENST00000384722 107 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 RNU6-258P-201ENST00000390884 101 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 MTND3P20-201ENST00000407663 186 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 MTND1P11-201ENST00000456661 876 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 SNORA31.14-201ENST00000516728 116 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.08□□□□□ -2.58
COL6A5A8TX70 MIR4639-201ENST00000584938 69 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC008608.1-201ENST00000603910 127 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC018889.1-201ENST00000605372 397 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC080013.3-201ENST00000606839 578 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 AC097478.2-201ENST00000610572 514 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.08□□□□□ -2.58
COL6A5A8TX70 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 MTCO3P41-201ENST00000414801 328 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 AC104629.2-201ENST00000468627 598 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 RNU6-685P-201ENST00000517088 95 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 AC068339.1-201ENST00000526965 141 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.09□□□□□ -2.58
COL6A5A8TX70 RNU6-336P-201ENST00000364891 107 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 RNU6-841P-201ENST00000383872 107 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 MIR1302-7-201ENST00000408841 72 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 MIR2115-201ENST00000516657 100 ntBASIC-1.09□□□□□ -2.58
COL6A5A8TX70 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.09□□□□□ -2.58
COL6A5A8TX70 RNU6-545P-201ENST00000362681 104 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 SNORA67.2-201ENST00000384300 149 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AC114491.1-201ENST00000416095 246 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.1□□□□□ -2.59
COL6A5A8TX70 RNA5SP47-201ENST00000517230 109 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 SNORD92-201ENST00000585078 85 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 SNORA18-201ENST00000384416 132 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 GPM6BP2-201ENST00000432046 144 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AC068135.1-201ENST00000446164 246 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 GPM6BP1-201ENST00000446387 144 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 RNU6-840P-201ENST00000517275 65 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AL022154.1-201ENST00000604698 785 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AC008250.2-201ENST00000615261 205 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 AC073869.9-201ENST00000641610 120 ntBASIC-1.1□□□□□ -2.59
COL6A5A8TX70 RNA5SP48-201ENST00000363969 126 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.11□□□□□ -2.59
COL6A5A8TX70 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.11□□□□□ -2.59
COL6A5A8TX70 SNORA25.17-201ENST00000517184 124 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 AP001189.2-201ENST00000527320 189 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 SNORA59B-202ENST00000578183 701 ntBASIC-1.11□□□□□ -2.59
COL6A5A8TX70 AC253576.2-201ENST00000618815 580 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms