Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MIR518F-201ENST00000384973 87 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 RNA5SP25-201ENST00000410815 110 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 MTND4P18-201ENST00000447010 465 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AF186996.7-201ENST00000492781 209 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 AC019226.2-201ENST00000625973 424 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 ZNF299P-201ENST00000406845 1804 ntBASIC-1.08□□□□□ -2.58
CPSF4LA6NMK7 MIR30D-201ENST00000362283 70 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 SNORD56.2-201ENST00000363242 71 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU6-236P-201ENST00000363886 106 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 MIR635-201ENST00000384830 98 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 MIR522-201ENST00000385071 87 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU6-298P-201ENST00000390888 96 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 MIR320B2-201ENST00000408479 138 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 MTCO2P8-201ENST00000412213 658 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 AC108059.2-201ENST00000434626 151 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 HMGN2P32-201ENST00000444648 269 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU6-329P-201ENST00000459618 107 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RPL7P42-201ENST00000481005 679 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 RNU2-13P-201ENST00000515909 113 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 AC026741.1-201ENST00000605892 482 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 AC022960.3-201ENST00000619794 441 ntBASIC-1.09□□□□□ -2.58
CPSF4LA6NMK7 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 RNU6-245P-201ENST00000384020 107 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 RNU6-291P-201ENST00000384720 107 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 MIR588-201ENST00000384900 83 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 MT-TF-201ENST00000387314 71 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 SSR1P2-201ENST00000415208 787 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 MTATP6P23-201ENST00000440153 476 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 AL137792.2-201ENST00000443484 235 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 RNA5SP20-201ENST00000515976 84 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 MIR548AX-201ENST00000580117 73 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 AL121992.2-201ENST00000606262 256 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 AC105081.1-201ENST00000617727 106 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 AC137590.2-201ENST00000619709 240 ntBASIC-1.1□□□□□ -2.59
CPSF4LA6NMK7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 RNU6-468P-201ENST00000384003 109 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 MIR450B-201ENST00000401182 78 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 MIR1265-201ENST00000408444 86 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 RNU4-83P-201ENST00000410863 133 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 MTND1P14-201ENST00000427400 950 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 AL500527.2-201ENST00000454105 95 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 AC018710.1-201ENST00000506509 158 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 SNORA25.17-201ENST00000517184 124 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 MIR3118-1-201ENST00000581787 76 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 AC009159.2-201ENST00000617603 606 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 AC126544.2-201ENST00000625174 749 ntBASIC-1.11□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 SNORA27.1-201ENST00000362604 124 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RNU6-715P-201ENST00000365204 103 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RNU6-224P-201ENST00000384055 107 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RNU6-35P-201ENST00000384530 107 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 SNORA40.2-201ENST00000390847 128 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RNA5SP337-201ENST00000517007 109 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RNU6-201P-201ENST00000517100 61 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 SCARNA1-201ENST00000517138 166 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 RMST_3.1-201ENST00000611651 109 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 AC073869.9-201ENST00000641610 120 ntBASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.12□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 RNU6-490P-201ENST00000362985 107 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 RNU6-407P-201ENST00000365280 104 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 RNU6-883P-201ENST00000384597 107 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 RNU6-455P-201ENST00000384681 107 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 MIR516B1-201ENST00000385211 90 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 RNU6-387P-201ENST00000411331 105 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 MTND4P3-201ENST00000417829 541 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 MTCO2P27-201ENST00000420740 428 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 snoU13.2-201ENST00000459201 104 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 RNU6-830P-201ENST00000516353 107 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 SNORA25.13-201ENST00000516395 103 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 AC097460.3-201ENST00000623099 442 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 AL445984.1-201ENST00000637834 659 ntBASIC-1.13□□□□□ -2.59
CPSF4LA6NMK7 SNORD114-25-201ENST00000363742 72 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms