Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU6-475P-201ENST00000516073 104 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 FRG2DP-202ENST00000566967 323 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 MIR4499-201ENST00000584834 69 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.39□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 U8.6-201ENST00000364939 135 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 SNORA51.10-201ENST00000384418 136 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 RPL7P42-201ENST00000481005 679 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 MIR544B-201ENST00000582372 78 ntBASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.4□□□□□ -2.63
RGPD3A6NKT7 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 RNU6-47P-201ENST00000383866 107 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 RNU6-721P-201ENST00000410155 105 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 SNORA13-201ENST00000458790 133 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 MTCO3P38-201ENST00000468910 766 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 RNU6-344P-201ENST00000516635 111 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 MIR6740-201ENST00000618268 113 ntBASIC-1.41□□□□□ -2.63
RGPD3A6NKT7 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 MIR518B-201ENST00000385127 83 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 SNORD28B-201ENST00000390993 75 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 SNORD110-201ENST00000408189 75 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 ELOCP17-201ENST00000414751 326 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 AC114491.1-201ENST00000416095 246 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 AC104072.1-201ENST00000568817 668 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 MTND1P7-201ENST00000632801 297 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 RNU6-490P-201ENST00000362985 107 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 SNORA22B-201ENST00000383876 138 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 SNRPGP10-201ENST00000432323 225 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 AC011458.1-201ENST00000604034 617 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 Z94722.1-201ENST00000604328 474 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 AL139418.1-201ENST00000613613 177 ntBASIC-1.42□□□□□ -2.64
RGPD3A6NKT7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 MTND4LP14-201ENST00000429447 288 ntBASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 UQCRBP2-201ENST00000447827 297 ntBASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 RNA5SP454-201ENST00000517231 127 ntBASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 AL445435.1-201ENST00000604232 665 ntBASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 AC022306.3-201ENST00000619930 550 ntBASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.43□□□□□ -2.64
RGPD3A6NKT7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AC073343.1-201ENST00000328239 651 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 U6.112-201ENST00000384129 70 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 RNU6-901P-201ENST00000384593 106 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 SNORA75.4-201ENST00000391278 119 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AC090844.1-201ENST00000422019 156 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 RNA5SP180-201ENST00000516181 101 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 RNU7-172P-201ENST00000517125 64 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AC078880.5-201ENST00000617845 421 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 MIR1257-201ENST00000408490 117 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 USP9YP12-201ENST00000450481 570 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AC116353.2-201ENST00000505332 712 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 AC138207.3-201ENST00000585289 166 ntBASIC-1.44□□□□□ -2.64
RGPD3A6NKT7 SNORA36A-201ENST00000384221 132 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 RNU6-376P-201ENST00000384731 106 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 MTCO3P40-201ENST00000392516 676 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 SNORD93-201ENST00000408813 74 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 RNU6-602P-201ENST00000411155 105 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 AC107027.2-201ENST00000512197 115 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 AC010493.1-201ENST00000513479 292 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 AC091948.2-201ENST00000636510 279 ntBASIC-1.45□□□□□ -2.64
RGPD3A6NKT7 SNORD115-44-201ENST00000365391 82 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 MIR320C1-201ENST00000408566 88 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 USP9YP21-201ENST00000420603 432 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 AC117522.1-201ENST00000509821 380 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 MIR8055-201ENST00000610739 97 ntBASIC-1.46□□□□□ -2.64
RGPD3A6NKT7 AC023158.2-201ENST00000614876 543 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms