Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SNORD56.3-201ENST00000363507 71 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 Y_RNA.199-201ENST00000364014 102 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 Y_RNA.274-201ENST00000364714 101 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 U8.13-201ENST00000390842 128 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 AL359511.1-201ENST00000402970 211 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 RNU2-64P-201ENST00000411315 191 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 AC104027.1-201ENST00000521887 300 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 MIR5688-201ENST00000580619 83 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 AL359821.1-201ENST00000605519 182 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 AC245884.12-201ENST00000615364 59 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 MIR548AY-201ENST00000617669 107 ntBASIC2.8□□□□□ -1.96
CCDC85CA6NKD9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 MIR411-201ENST00000362239 96 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 Y_RNA.83-201ENST00000363005 113 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 RNU6-653P-201ENST00000363074 106 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 SNORA3A-201ENST00000364113 130 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 RNU6-144P-201ENST00000383951 107 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 RNA5SP467-201ENST00000391274 118 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 RNA5SP511-201ENST00000410487 115 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 RNA5SP270-201ENST00000411361 118 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 RNU6-63P-201ENST00000516690 95 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 SNORA31.25-201ENST00000517242 134 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 SCARNA20.6-201ENST00000517251 106 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 AC127455.1-201ENST00000565496 145 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 AC002984.1-201ENST00000591692 448 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
CCDC85CA6NKD9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 RNU1-35P-201ENST00000362782 153 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 RNU6-862P-201ENST00000362804 105 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 RNU6-1048P-201ENST00000364054 107 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 RNU6-42P-201ENST00000384165 107 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 SNORA11.4-201ENST00000408823 129 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 RN7SKP123-201ENST00000410732 291 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 RNU1-104P-201ENST00000517280 175 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 AC100767.1-201ENST00000528178 123 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 Z83818.1-201ENST00000603584 150 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 AL365265.1-201ENST00000621045 234 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 AC068647.2-201ENST00000637380 353 ntBASIC2.78□□□□□ -1.96
CCDC85CA6NKD9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 RNA5SP383-201ENST00000362934 120 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 SNORA33-201ENST00000363664 130 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 Y_RNA.262-201ENST00000364641 102 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 U8.7-201ENST00000364940 136 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 MIR520G-201ENST00000385064 90 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 SNORA17.3-201ENST00000391159 129 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 BTF3P4-201ENST00000418852 495 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 RPS15AP28-201ENST00000435088 386 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 MTND2P29-201ENST00000438595 412 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 RNU1-142P-201ENST00000516682 145 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 AC024405.2-202ENST00000532731 184 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 CBX3P4-201ENST00000538909 354 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 AC091178.2-201ENST00000584401 117 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 AC008264.2-201ENST00000610193 3731 ntBASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC85CA6NKD9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 AC068700.1-201ENST00000565862 3754 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 MIR148B-201ENST00000362252 99 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 Y_RNA.297-201ENST00000364950 91 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 SNORA72-201ENST00000384339 132 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 RNU6-376P-201ENST00000384731 106 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 MIR526A2-201ENST00000390198 65 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 MTCO2P33-201ENST00000402100 465 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 HSPE1P21-201ENST00000438283 308 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 RPS4XP11-201ENST00000446897 772 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 RNU1-143P-201ENST00000516296 146 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 AC073413.2-201ENST00000604332 360 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 U1.23-201ENST00000610293 146 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 RNU1-68P-201ENST00000615382 146 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 U1.39-201ENST00000621562 146 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 AC073476.4-201ENST00000628409 72 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 AC018630.2-201ENST00000534866 2403 ntBASIC2.76□□□□□ -1.97
CCDC85CA6NKD9 AC100821.1-201ENST00000523153 2479 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 RNU6-674P-201ENST00000363831 107 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 SNORA67.3-201ENST00000384366 140 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 MIR597-201ENST00000384968 97 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 SNORA48.1-201ENST00000390879 135 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 RNU11-3P-201ENST00000391111 133 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 AL138752.1-201ENST00000452964 351 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 RNU7-94P-201ENST00000459576 63 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 AC003982.1-202ENST00000469928 248 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 POLR3GP1-201ENST00000594073 261 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.75□□□□□ -1.97
CCDC85CA6NKD9 AC134026.1-201ENST00000623249 2239 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms