Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 SNORD65.1-201ENST00000390889 71 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 SNAP23P1-201ENST00000433229 246 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 MRPS10P1-201ENST00000448483 130 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 AC091959.1-201ENST00000495857 238 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 SNORD38.3-201ENST00000516599 73 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 RNU6-430P-201ENST00000517078 107 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 RNU7-172P-201ENST00000517125 64 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 AC021451.1-201ENST00000523498 1129 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.73□□□□□ -2.69
HFM1A2PYH4 AC091948.2-201ENST00000636510 279 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.73□□□□□ -2.69
HFM1A2PYH4 RNU6-740P-201ENST00000364734 105 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-25P-201ENST00000383873 107 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-29P-201ENST00000384637 107 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 snoU13.6-201ENST00000458785 104 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 SCARNA18B-201ENST00000458806 135 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-158P-201ENST00000517104 100 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 MT-TY-201ENST00000387409 66 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 SNORA75.4-201ENST00000391278 119 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 AC090844.1-201ENST00000422019 156 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 BX276092.1-201ENST00000427368 251 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-86P-201ENST00000606534 107 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 AC072039.2-201ENST00000608883 439 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 AP002782.1-201ENST00000623107 614 ntBASIC-1.74□□□□□ -2.69
HFM1A2PYH4 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.75□□□□□ -2.69
HFM1A2PYH4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.75□□□□□ -2.69
HFM1A2PYH4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.75□□□□□ -2.69
HFM1A2PYH4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.75□□□□□ -2.69
HFM1A2PYH4 MTND3P25-201ENST00000509243 135 ntBASIC-1.75□□□□□ -2.69
HFM1A2PYH4 AC091133.4-201ENST00000511142 308 ntBASIC-1.75□□□□□ -2.69
HFM1A2PYH4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.75□□□□□ -2.69
HFM1A2PYH4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.76□□□□□ -2.69
HFM1A2PYH4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.76□□□□□ -2.69
HFM1A2PYH4 RPL7P42-201ENST00000481005 679 ntBASIC-1.76□□□□□ -2.69
HFM1A2PYH4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.76□□□□□ -2.69
HFM1A2PYH4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.76□□□□□ -2.69
HFM1A2PYH4 AC022306.3-201ENST00000619930 550 ntBASIC-1.76□□□□□ -2.69
HFM1A2PYH4 AL445523.1-201ENST00000451184 1362 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.77□□□□□ -2.69
HFM1A2PYH4 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 SNORD51.1-201ENST00000365405 77 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 RPS29P13-201ENST00000402041 169 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 SSR1P2-201ENST00000415208 787 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 MTCO3P19-201ENST00000415864 321 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 AP000542.1-201ENST00000448473 371 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 EPS15P1-201ENST00000448836 336 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 AL358944.1-201ENST00000528537 144 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 AF250324.2-201ENST00000608299 610 ntBASIC-1.77□□□□□ -2.69
HFM1A2PYH4 RNY4P27-201ENST00000363341 96 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 MIR9-2-201ENST00000384838 87 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 SNORA13-201ENST00000458790 133 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.78□□□□□ -2.69
HFM1A2PYH4 AC021146.9-201ENST00000512503 156 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.78□□□□□ -2.69
HFM1A2PYH4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.78□□□□□ -2.69
HFM1A2PYH4 AC008873.1-201ENST00000625051 138 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 MTND5P18-201ENST00000445624 1801 ntBASIC-1.78□□□□□ -2.69
HFM1A2PYH4 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 MIR518F-201ENST00000384973 87 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 U8.17-201ENST00000391292 132 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 SNORD110-201ENST00000408189 75 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.79□□□□□ -2.7
HFM1A2PYH4 CALM2P2-201ENST00000428512 440 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.79□□□□□ -2.7
HFM1A2PYH4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-1.79□□□□□ -2.7
HFM1A2PYH4 AC011458.1-201ENST00000604034 617 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 MIR6851-201ENST00000617060 67 ntBASIC-1.79□□□□□ -2.7
HFM1A2PYH4 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 RNU6-855P-201ENST00000410395 104 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.8□□□□□ -2.7
HFM1A2PYH4 SNORA25.13-201ENST00000516395 103 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 ADI1P3-201ENST00000549509 470 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 MIR3179-1-201ENST00000578940 84 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 MIR3179-2-201ENST00000579107 84 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 MIR3179-3-201ENST00000579566 84 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 MIR3179-4-201ENST00000617599 84 ntBASIC-1.8□□□□□ -2.7
HFM1A2PYH4 RNU6-777P-201ENST00000364265 104 ntBASIC-1.81□□□□□ -2.7
HFM1A2PYH4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
HFM1A2PYH4 RNA5SP261-201ENST00000410536 106 ntBASIC-1.81□□□□□ -2.7
HFM1A2PYH4 RNU6-607P-201ENST00000411283 108 ntBASIC-1.81□□□□□ -2.7
HFM1A2PYH4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.81□□□□□ -2.7
HFM1A2PYH4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.81□□□□□ -2.7
HFM1A2PYH4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.81□□□□□ -2.7
HFM1A2PYH4 RNA5SP33-201ENST00000516687 98 ntBASIC-1.81□□□□□ -2.7
HFM1A2PYH4 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms