Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 RAB11AP2-201ENST00000545905 639 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC004467.1-201ENST00000615678 330 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC073349.3-201ENST00000617616 186 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 U2.1-201ENST00000618978 145 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC104985.2-201ENST00000620598 500 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AL513423.1-201ENST00000621695 132 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 U6.92-201ENST00000636464 89 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC112487.2-201ENST00000637950 304 ntBASIC1.09□□□□□ -2.23
SMIM28A0A1B0GU29 AC005592.1-201ENST00000566527 1640 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.463-201ENST00000384271 102 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1065P-201ENST00000384513 106 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 RNA5SP475-201ENST00000410568 110 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 SNORD19B-201ENST00000459623 84 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1012P-201ENST00000516606 109 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-341P-201ENST00000516973 96 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 MIR3684-201ENST00000579779 74 ntBASIC1.08□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-490P-201ENST00000362985 107 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.224-201ENST00000364308 111 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-424P-201ENST00000384367 105 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-136P-201ENST00000384663 107 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 SNORD78.2-201ENST00000391076 69 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 U8.16-201ENST00000391279 133 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1199P-201ENST00000411249 104 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 AF228730.4-201ENST00000421457 183 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 SNX2P2-201ENST00000424553 323 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 FCF1P4-201ENST00000448326 183 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 RNA5SP168-201ENST00000516642 112 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-113P-201ENST00000516653 101 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 MIR548S-201ENST00000581352 82 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 RBM11P1-201ENST00000604951 799 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 AC133104.2-201ENST00000615272 193 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 AC240442.1-201ENST00000616055 283 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 SNORD3E-202ENST00000627253 216 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 MIR4272-201ENST00000635924 64 ntBASIC1.07□□□□□ -2.24
SMIM28A0A1B0GU29 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 MIRLET7C-201ENST00000362160 84 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.58-201ENST00000362807 102 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.70-201ENST00000362886 110 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.154-201ENST00000363624 102 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.172-201ENST00000363765 102 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.263-201ENST00000364659 114 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RNY3P1-201ENST00000365085 102 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RNY3-201ENST00000365484 102 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 SNORD116-13-201ENST00000384408 92 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AL031003.1-201ENST00000404229 172 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.605-201ENST00000410577 105 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RPEP5-201ENST00000441137 268 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RPL39P38-201ENST00000467018 153 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1278P-201ENST00000516130 107 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-922P-201ENST00000516753 99 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RNU2-56P-201ENST00000516826 190 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1096P-201ENST00000517089 102 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AC144568.1-201ENST00000520139 137 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AC019288.1-201ENST00000557918 224 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AC008269.2-201ENST00000561915 1105 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 MIR3664-201ENST00000579074 99 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 MIR4659A-201ENST00000580269 81 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AC091925.1-201ENST00000623204 462 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 AC127459.3-201ENST00000624328 466 ntBASIC1.06□□□□□ -2.24
SMIM28A0A1B0GU29 MIR373-201ENST00000362273 69 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.356-201ENST00000365475 113 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.384-201ENST00000383909 102 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-20P-201ENST00000384106 107 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 MIR628-201ENST00000385229 95 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 SNORD41-201ENST00000386967 70 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 RNA5SP511-201ENST00000410487 115 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 AC099799.1-201ENST00000439809 192 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 DYNLT3P2-201ENST00000442517 295 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 AC093850.1-201ENST00000454121 251 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-917P-201ENST00000516294 104 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1337P-201ENST00000516525 95 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 RPL21P9-201ENST00000556149 474 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 AC006600.1-201ENST00000572529 153 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 AC068647.2-201ENST00000637380 353 ntBASIC1.05□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.116-201ENST00000363292 103 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RNU4-76P-201ENST00000364509 141 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 Y_RNA.265-201ENST00000364677 108 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RNU6-1009P-201ENST00000390996 107 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RNU2-54P-201ENST00000410299 190 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 AL354751.2-201ENST00000415471 210 ntBASIC1.04□□□□□ -2.24
SMIM28A0A1B0GU29 RPS4XP11-201ENST00000446897 772 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms