Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AC117470.1-201ENST00000381974 330 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 MTCO2P12-201ENST00000427426 682 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 AC098934.3-201ENST00000430450 190 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 UBE2V1P7-201ENST00000446395 340 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 ELOCP24-201ENST00000456370 334 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-1132P-201ENST00000459214 107 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 AC018448.1-201ENST00000552843 316 ntBASIC0.3□□□□□ -2.36
TRAV25A0A0B4J276 Y_RNA.414-201ENST00000384011 101 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-1145P-201ENST00000384246 107 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-306P-201ENST00000384617 107 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 DEFB108C-201ENST00000400154 252 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 AL354751.2-201ENST00000415471 210 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 MRPS18CP6-201ENST00000423587 223 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 EIF1P2-201ENST00000428233 350 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 AC005534.2-201ENST00000431047 433 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 MTND1P4-201ENST00000435196 415 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 RNU7-66P-201ENST00000459469 62 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-63P-201ENST00000516690 95 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 AC125232.2-201ENST00000592457 143 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 AL591926.4-201ENST00000616895 298 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 MIR3674-201ENST00000636576 68 ntBASIC0.29□□□□□ -2.36
TRAV25A0A0B4J276 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-259P-201ENST00000383999 107 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-1119P-201ENST00000384349 108 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 SNORA2B-201ENST00000384583 137 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 AC104695.3-201ENST00000604052 296 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.36
TRAV25A0A0B4J276 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-1084P-201ENST00000362498 107 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-1310P-201ENST00000384153 107 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 SNORD116-8-201ENST00000384365 95 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-177P-201ENST00000411257 104 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-1304P-201ENST00000411374 106 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 HMGN2P32-201ENST00000444648 269 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-625P-201ENST00000459412 107 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 OSBPL9P5-201ENST00000542581 171 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 AF250324.2-201ENST00000608299 610 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 AL355073.2-201ENST00000612106 557 ntBASIC0.27□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-879P-201ENST00000364328 108 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 Y_RNA.256-201ENST00000364594 104 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 RNY1P8-201ENST00000383970 114 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 RNA5SP511-201ENST00000410487 115 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 SNORA68.3-201ENST00000515906 83 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 RNU4-57P-201ENST00000515980 135 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 RNU1-54P-201ENST00000517181 120 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 MIR3611-201ENST00000584484 83 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 AL357075.2-201ENST00000614906 189 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 AC007742.2-201ENST00000618226 398 ntBASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV25A0A0B4J276 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 Y_RNA.364-201ENST00000365532 101 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-700P-201ENST00000391043 107 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 MIR190B-201ENST00000401119 79 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 DLGAP5P1-201ENST00000430307 464 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 AL392103.1-201ENST00000447000 198 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 U8.19-201ENST00000459095 133 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 U8.22-201ENST00000459141 133 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 SNORD123-201ENST00000459473 70 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 MTND2P38-201ENST00000522536 667 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 AC022616.4-201ENST00000522985 181 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 RN7SKP299-201ENST00000606679 301 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 AC008133.2-201ENST00000624540 351 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 MIR4251-201ENST00000635819 61 ntBASIC0.25□□□□□ -2.37
TRAV25A0A0B4J276 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 Y_RNA.118-201ENST00000363300 101 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-454P-201ENST00000364292 107 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 Y_RNA.243-201ENST00000364481 109 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 snoU2-30.1-201ENST00000365012 70 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 Y_RNA.370-201ENST00000365589 108 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-483P-201ENST00000384088 108 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 RNU6-908P-201ENST00000410160 94 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 MTND4LP16-201ENST00000440828 295 ntBASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV25A0A0B4J276 RNU7-87P-201ENST00000459343 62 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms