Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MIR522-201ENST00000385071 87 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AC091179.3-201ENST00000474761 144 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AC074198.2-201ENST00000508153 258 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AC091144.1-201ENST00000519573 138 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 MTND4LP18-201ENST00000526864 291 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 BNIP3P40-201ENST00000596017 556 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AC022306.2-201ENST00000617563 647 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 MIR6740-201ENST00000618268 113 ntBASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.02□□□□□ -2.57
TRAV13-2A0A0B4J235 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.03□□□□□ -2.57
TRAV13-2A0A0B4J235 MIR3941-201ENST00000582572 103 ntBASIC-1.03□□□□□ -2.57
TRAV13-2A0A0B4J235 MIR4677-201ENST00000584153 80 ntBASIC-1.03□□□□□ -2.57
TRAV13-2A0A0B4J235 MIR4791-201ENST00000607666 84 ntBASIC-1.03□□□□□ -2.57
TRAV13-2A0A0B4J235 SNORD114-14-201ENST00000362723 75 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 RNY1P12-201ENST00000364251 105 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-533P-201ENST00000384144 107 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR563-201ENST00000385080 79 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 SNORD73A-201ENST00000386062 65 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 AC244250.2-201ENST00000418731 148 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 AC090844.1-201ENST00000422019 156 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 RPL23AP75-201ENST00000491601 451 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.673-201ENST00000516306 88 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 AC138749.4-201ENST00000563970 127 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR3684-201ENST00000579779 74 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 AC125232.2-201ENST00000592457 143 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 AL359999.1-201ENST00000604513 294 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 U7.6-201ENST00000610841 64 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.04□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR625-201ENST00000385047 85 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 RPS27AP14-201ENST00000422868 454 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-329P-201ENST00000459618 107 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-758P-201ENST00000516292 89 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 SNORA31.14-201ENST00000516728 116 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR5706-201ENST00000579841 80 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR4775-201ENST00000581168 75 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR4639-201ENST00000584938 69 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 AC104010.1-201ENST00000616889 150 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 AC134878.1-201ENST00000619901 243 ntBASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.05□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-169P-201ENST00000365336 107 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 MTCYBP4-201ENST00000401524 249 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 FCF1P9-201ENST00000412546 282 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AC010486.3-201ENST00000511602 785 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AC126544.2-201ENST00000625174 749 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 AL163152.1-201ENST00000642001 374 ntBASIC-1.06□□□□□ -2.58
TRAV13-2A0A0B4J235 RNA5SP205-201ENST00000364653 136 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 SNORD50B-201ENST00000364995 70 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 Z95118.1-201ENST00000421372 247 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 MTND3P1-201ENST00000441336 220 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 U8.21-201ENST00000459536 136 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR378D2-201ENST00000580636 98 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR4636-201ENST00000582271 80 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 AC108676.2-201ENST00000605225 163 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR8066-201ENST00000617280 78 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 AC244669.1-204ENST00000621564 178 ntBASIC-1.07□□□□□ -2.58
TRAV13-2A0A0B4J235 SNORA20.2-201ENST00000383922 131 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR518F-201ENST00000384973 87 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 MIR873-201ENST00000401120 77 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 RN7SKP142-201ENST00000411236 328 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 RNU4-63P-201ENST00000411313 118 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 AC080013.3-201ENST00000606839 578 ntBASIC-1.08□□□□□ -2.58
TRAV13-2A0A0B4J235 uc_338.28-201ENST00000612082 187 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms