Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU6-239P-201ENST00000390990 99 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 CR769767.1-201ENST00000436337 346 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 U8.19-201ENST00000459095 133 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 SNORA4.4-201ENST00000515921 135 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 RNU6-436P-201ENST00000516171 114 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 RNU6-155P-201ENST00000516347 100 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 AC021269.2-201ENST00000532318 330 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 MIR1273D-201ENST00000577266 86 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 snoZ196.1-201ENST00000625269 89 ntBASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC187A0A096LP49 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 Y_RNA.329-201ENST00000365209 107 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 RNU6-1235P-201ENST00000384559 107 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 EDDM3CP-201ENST00000415977 425 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 MTND4LP9-201ENST00000427694 174 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 RNU6-498P-201ENST00000459468 107 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC187A0A096LP49 AC010332.2-201ENST00000613083 1904 ntBASIC2.34□□□□□ -2.04
CCDC187A0A096LP49 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 ZNF271P-202ENST00000465539 1970 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 RNU6-151P-201ENST00000364158 107 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 Y_RNA.273-201ENST00000364703 102 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 RNU6-418P-201ENST00000384035 107 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 SNORA26.5-201ENST00000391215 123 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 MTCO1P44-201ENST00000441935 243 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 AL357134.1-201ENST00000445848 426 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 AC016717.1-201ENST00000448918 286 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 RNU6-221P-201ENST00000459541 99 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 AC010531.2-201ENST00000465012 153 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 AC026271.5-201ENST00000577873 130 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 MIR3684-201ENST00000579779 74 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 MIR4431-201ENST00000579990 94 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 MIR5092-201ENST00000583139 88 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 AC006380.1-201ENST00000603598 186 ntBASIC2.33□□□□□ -2.04
CCDC187A0A096LP49 Y_RNA.127-201ENST00000363386 109 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 RNU6-899P-201ENST00000363947 107 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 SNORA3A-201ENST00000364113 130 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 RNU6-1248P-201ENST00000391096 64 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 U3.40-201ENST00000408706 208 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 RNU6-57P-201ENST00000411348 103 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 EBAG9P1-201ENST00000418955 543 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 AC008267.6-201ENST00000441664 139 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 AC245102.2-201ENST00000448956 180 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 RNU7-197P-201ENST00000458836 62 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 AC009127.3-201ENST00000570531 403 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 MIR548X2-201ENST00000579776 100 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 MIR3658-201ENST00000636291 56 ntBASIC2.32□□□□□ -2.04
CCDC187A0A096LP49 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 Y_RNA.71-201ENST00000362892 104 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNU6-1048P-201ENST00000364054 107 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 SNORD115-30-201ENST00000364117 82 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 Y_RNA.357-201ENST00000365487 109 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 SNORA40-201ENST00000388090 126 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNU6-578P-201ENST00000390980 103 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNA5SP210-201ENST00000391034 120 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNA5SP137-201ENST00000516833 135 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 RNU6-971P-201ENST00000516920 106 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 AC136628.3-201ENST00000521868 290 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 AC013791.1-201ENST00000616619 62 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 AC012640.5-201ENST00000623897 319 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 AC134026.1-201ENST00000623249 2239 ntBASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC187A0A096LP49 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 MIR340-201ENST00000362125 95 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 RNU4-11P-201ENST00000365287 132 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 SNORD116-14-201ENST00000383894 92 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 SNORD116-17-201ENST00000383929 92 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 RNU6-44P-201ENST00000384045 107 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 SNORD14D-201ENST00000384390 87 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 SNORD116-15-201ENST00000384445 92 ntBASIC2.3□□□□□ -2.04
CCDC187A0A096LP49 SNORD116-19-201ENST00000384729 92 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms