Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.79□□□□□ -1.96
U3KQE9 AL355297.2-201ENST00000604792 129 ntBASIC2.79□□□□□ -1.96
U3KQE9 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
U3KQE9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.79□□□□□ -1.96
U3KQE9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
U3KQE9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.79□□□□□ -1.96
U3KQE9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
U3KQE9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
U3KQE9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
U3KQE9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
U3KQE9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
U3KQE9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
U3KQE9 MIR423-201ENST00000362201 94 ntBASIC2.78□□□□□ -1.96
U3KQE9 RNU6-268P-201ENST00000364174 107 ntBASIC2.78□□□□□ -1.96
U3KQE9 RNU6-820P-201ENST00000384273 107 ntBASIC2.78□□□□□ -1.96
U3KQE9 SNORA8-201ENST00000384574 139 ntBASIC2.78□□□□□ -1.96
U3KQE9 RNU6-160P-201ENST00000384591 107 ntBASIC2.78□□□□□ -1.96
U3KQE9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.78□□□□□ -1.96
U3KQE9 RPS29P31-201ENST00000446147 164 ntBASIC2.78□□□□□ -1.96
U3KQE9 RN7SL330P-201ENST00000469709 307 ntBASIC2.78□□□□□ -1.96
U3KQE9 RNU7-25P-201ENST00000516544 62 ntBASIC2.78□□□□□ -1.96
U3KQE9 RNU6-762P-201ENST00000517107 102 ntBASIC2.78□□□□□ -1.96
U3KQE9 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.78□□□□□ -1.96
U3KQE9 AC074050.1-201ENST00000563247 211 ntBASIC2.78□□□□□ -1.96
U3KQE9 AL162726.3-218ENST00000636401 95 ntBASIC2.78□□□□□ -1.96
U3KQE9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
U3KQE9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
U3KQE9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
U3KQE9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.78□□□□□ -1.96
U3KQE9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.97
U3KQE9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
U3KQE9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
U3KQE9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
U3KQE9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.77□□□□□ -1.97
U3KQE9 Y_RNA.388-201ENST00000383919 113 ntBASIC2.77□□□□□ -1.97
U3KQE9 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
U3KQE9 MIR591-201ENST00000385290 95 ntBASIC2.77□□□□□ -1.97
U3KQE9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
U3KQE9 RPL21P3-201ENST00000395517 478 ntBASIC2.77□□□□□ -1.97
U3KQE9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.77□□□□□ -1.97
U3KQE9 AC006539.3-201ENST00000454258 129 ntBASIC2.77□□□□□ -1.97
U3KQE9 AC026402.1-201ENST00000513642 170 ntBASIC2.77□□□□□ -1.97
U3KQE9 RNU6-667P-201ENST00000517186 102 ntBASIC2.77□□□□□ -1.97
U3KQE9 SUMO2P16-201ENST00000519475 264 ntBASIC2.77□□□□□ -1.97
U3KQE9 MIR5685-201ENST00000579080 79 ntBASIC2.77□□□□□ -1.97
U3KQE9 MIR4305-201ENST00000583252 102 ntBASIC2.77□□□□□ -1.97
U3KQE9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.77□□□□□ -1.97
U3KQE9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
U3KQE9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.77□□□□□ -1.97
U3KQE9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
U3KQE9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
U3KQE9 MIR488-201ENST00000365739 83 ntBASIC2.76□□□□□ -1.97
U3KQE9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.76□□□□□ -1.97
U3KQE9 SNORA57.3-201ENST00000411095 141 ntBASIC2.76□□□□□ -1.97
U3KQE9 RHEBP3-201ENST00000411920 351 ntBASIC2.76□□□□□ -1.97
U3KQE9 AC003685.2-201ENST00000422795 395 ntBASIC2.76□□□□□ -1.97
U3KQE9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.76□□□□□ -1.97
U3KQE9 RN7SKP21-201ENST00000516503 220 ntBASIC2.76□□□□□ -1.97
U3KQE9 SNORD115-40-201ENST00000606510 82 ntBASIC2.76□□□□□ -1.97
U3KQE9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.76□□□□□ -1.97
U3KQE9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
U3KQE9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
U3KQE9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
U3KQE9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.75□□□□□ -1.97
U3KQE9 SNORD68-201ENST00000363214 84 ntBASIC2.75□□□□□ -1.97
U3KQE9 RNU4-36P-201ENST00000364294 144 ntBASIC2.75□□□□□ -1.97
U3KQE9 Y_RNA.344-201ENST00000365381 112 ntBASIC2.75□□□□□ -1.97
U3KQE9 Z98941.1-201ENST00000407764 100 ntBASIC2.75□□□□□ -1.97
U3KQE9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.75□□□□□ -1.97
U3KQE9 TRIAP1P1-201ENST00000427062 225 ntBASIC2.75□□□□□ -1.97
U3KQE9 RNU7-123P-201ENST00000515911 60 ntBASIC2.75□□□□□ -1.97
U3KQE9 AP003484.1-201ENST00000530974 250 ntBASIC2.75□□□□□ -1.97
U3KQE9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.75□□□□□ -1.97
U3KQE9 MIR3186-201ENST00000577404 85 ntBASIC2.75□□□□□ -1.97
U3KQE9 MIR3160-1-201ENST00000577972 85 ntBASIC2.75□□□□□ -1.97
U3KQE9 MALAT1.1-201ENST00000618249 95 ntBASIC2.75□□□□□ -1.97
U3KQE9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.75□□□□□ -1.97
U3KQE9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.75□□□□□ -1.97
U3KQE9 MFSD8-233ENST00000641482 4860 ntBASIC2.75□□□□□ -1.97
U3KQE9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
U3KQE9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
U3KQE9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
U3KQE9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
U3KQE9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
U3KQE9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
U3KQE9 Y_RNA.10-201ENST00000362371 110 ntBASIC2.74□□□□□ -1.97
U3KQE9 CD24P4-201ENST00000382840 243 ntBASIC2.74□□□□□ -1.97
U3KQE9 U8.11-201ENST00000384699 133 ntBASIC2.74□□□□□ -1.97
U3KQE9 MIR450A2-201ENST00000385022 100 ntBASIC2.74□□□□□ -1.97
U3KQE9 RNU1-101P-201ENST00000391171 127 ntBASIC2.74□□□□□ -1.97
U3KQE9 GOT2P5-201ENST00000433995 546 ntBASIC2.74□□□□□ -1.97
U3KQE9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.74□□□□□ -1.97
U3KQE9 RPS29P7-201ENST00000439662 171 ntBASIC2.74□□□□□ -1.97
U3KQE9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.74□□□□□ -1.97
U3KQE9 U3.44-201ENST00000458938 192 ntBASIC2.74□□□□□ -1.97
U3KQE9 U8.18-201ENST00000459285 133 ntBASIC2.74□□□□□ -1.97
U3KQE9 RN7SL297P-201ENST00000483161 293 ntBASIC2.74□□□□□ -1.97
U3KQE9 RNU2-27P-201ENST00000516185 142 ntBASIC2.74□□□□□ -1.97
U3KQE9 SNORD45.4-201ENST00000516629 73 ntBASIC2.74□□□□□ -1.97
U3KQE9 SNORA18.7-201ENST00000516910 131 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms