Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL596211.1-201ENST00000569873 2277 ntBASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HRH3Q9Y5N1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 SNORA8-201ENST00000384574 139 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 MIR590-201ENST00000385008 97 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 RNU7-164P-201ENST00000459221 62 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC021205.2-201ENST00000480069 347 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC023141.11-201ENST00000508864 202 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC141557.1-201ENST00000540982 400 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC084364.2-201ENST00000546924 395 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 MIR5187-201ENST00000583479 76 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC007179.3-201ENST00000604976 235 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC019176.2-201ENST00000611579 315 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC006441.5-201ENST00000612680 209 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC012314.7-201ENST00000619693 93 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 GABRG2-229ENST00000641017 3628 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 AC245060.5-201ENST00000610778 3293 ntBASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.42□□□□□ -1.86
HRH3Q9Y5N1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 Y_RNA.298-201ENST00000364960 107 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 snoU2-30.1-201ENST00000365012 70 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 Y_RNA.388-201ENST00000383919 113 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 RNY1P6-201ENST00000384193 109 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 MIR183-201ENST00000384958 110 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 AC107083.1-201ENST00000439643 279 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 RNU7-80P-201ENST00000459562 61 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 SUMO2P16-201ENST00000519475 264 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 MIR3163-201ENST00000581592 73 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 AL353149.1-201ENST00000610667 244 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 MIR376A2-201ENST00000636782 80 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HRH3Q9Y5N1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.4□□□□□ -1.86
HRH3Q9Y5N1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HRH3Q9Y5N1 MIR340-201ENST00000362125 95 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 SNORA1B-201ENST00000362535 133 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.454-201ENST00000384224 113 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 RNU1-131P-201ENST00000458943 161 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 RN7SL293P-201ENST00000481765 281 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 SNORA18.7-201ENST00000516910 131 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 RNU6-762P-201ENST00000517107 102 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 AL442128.1-201ENST00000615151 90 ntBASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
HRH3Q9Y5N1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 RNU6-349P-201ENST00000362402 107 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.37-201ENST00000362606 108 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 SNORA63D-201ENST00000364359 132 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.265-201ENST00000364677 108 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 SNORA9-201ENST00000384215 133 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 RPS29P4-201ENST00000414733 161 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 AL445646.1-201ENST00000431784 216 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 RNU6-109P-201ENST00000516364 107 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 RNU6-184P-201ENST00000516514 107 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 RNU7-25P-201ENST00000516544 62 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 RNU6-158P-201ENST00000517104 100 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 AC024995.1-201ENST00000523014 93 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 U6.105-201ENST00000637379 88 ntBASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HRH3Q9Y5N1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 MIR548D2-201ENST00000384955 97 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 ATP5J2P3-201ENST00000451550 258 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 RN7SL636P-201ENST00000497504 294 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 AC110768.1-201ENST00000509222 400 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 RNU6-830P-201ENST00000516353 107 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 RN7SKP209-201ENST00000516888 304 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 RNU6-667P-201ENST00000517186 102 ntBASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HRH3Q9Y5N1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 SNORA68.1-201ENST00000364537 132 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms