Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-1272P-201ENST00000362776 107 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-740P-201ENST00000364734 105 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-1289P-201ENST00000384431 106 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.552-201ENST00000384665 112 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORD58.1-201ENST00000391313 66 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 AC099677.2-201ENST00000436385 175 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 snoU13.26-201ENST00000459452 105 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU4-71P-201ENST00000516258 113 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR3671-201ENST00000580455 88 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.277-201ENST00000364754 102 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-144P-201ENST00000383951 107 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORA72.4-201ENST00000384174 132 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-662P-201ENST00000384253 104 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.477-201ENST00000384352 108 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR504-201ENST00000385065 83 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP450-201ENST00000411206 102 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 AC073413.2-201ENST00000604332 360 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 AC073349.3-201ENST00000617616 186 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 AC018630.2-201ENST00000534866 2403 ntBASIC2.39□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORD27-201ENST00000363981 72 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-801P-201ENST00000364087 105 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.515-201ENST00000384535 112 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-950P-201ENST00000384651 107 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP425-201ENST00000410336 112 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU4-53P-201ENST00000410828 140 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AC055731.1-201ENST00000474387 401 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR5094-201ENST00000578766 85 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR4282-201ENST00000583613 67 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AC004832.4-201ENST00000608952 331 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AC012640.5-201ENST00000623897 319 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AC068647.2-201ENST00000637380 353 ntBASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA9Q9Y5G4 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP511-201ENST00000410487 115 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 AL163195.1-201ENST00000496941 348 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-341P-201ENST00000516973 96 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR5688-201ENST00000580619 83 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 AP003357.1-201ENST00000604497 148 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 AC141273.2-201ENST00000618989 130 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR7843-201ENST00000622274 79 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 snoU18.1-201ENST00000629629 71 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR6079-201ENST00000635807 62 ntBASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA9Q9Y5G4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR6073-201ENST00000352083 89 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.60-201ENST00000362831 98 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU6-379P-201ENST00000363813 104 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 SNORA72-201ENST00000384339 132 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 BTF3P11-201ENST00000426582 477 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 snoU13.15-201ENST00000459407 104 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 MTND1P19-201ENST00000511780 315 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 RNU7-128P-201ENST00000517247 62 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 SUB1P4-201ENST00000566062 339 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 POLR3GP1-201ENST00000594073 261 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AC013791.1-201ENST00000616619 62 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 MIR548AY-201ENST00000617669 107 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 U6.108-201ENST00000637764 58 ntBASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.36□□□□□ -2.03
PCDHGA9Q9Y5G4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 592.9 ms